Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT9P35527 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT9P35527 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
KRT9P35527 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
KRT9P35527 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC15.34■□□□□ 0.05
KRT9P35527 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
KRT9P35527 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT9P35527 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.34■□□□□ 0.05
KRT9P35527 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.34■□□□□ 0.05
KRT9P35527 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
KRT9P35527 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.34■□□□□ 0.05
KRT9P35527 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.34■□□□□ 0.05
KRT9P35527 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.34■□□□□ 0.05
KRT9P35527 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
KRT9P35527 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.34■□□□□ 0.05
KRT9P35527 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
KRT9P35527 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.34■□□□□ 0.05
KRT9P35527 AC104982.3-201ENST00000581995 514 ntBASIC15.34■□□□□ 0.05
KRT9P35527 AC007663.3-201ENST00000609632 465 ntBASIC15.34■□□□□ 0.05
KRT9P35527 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.34■□□□□ 0.05
KRT9P35527 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC15.34■□□□□ 0.05
KRT9P35527 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
KRT9P35527 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.34■□□□□ 0.05
KRT9P35527 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT9P35527 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT9P35527 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC15.34■□□□□ 0.05
KRT9P35527 AHCYP4-201ENST00000419201 1315 ntBASIC15.34■□□□□ 0.05
KRT9P35527 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT9P35527 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
KRT9P35527 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
KRT9P35527 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT9P35527 AC004899.1-201ENST00000424687 1714 ntBASIC15.34■□□□□ 0.05
KRT9P35527 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
KRT9P35527 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT9P35527 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT9P35527 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
KRT9P35527 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
KRT9P35527 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
KRT9P35527 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.33■□□□□ 0.05
KRT9P35527 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
KRT9P35527 AC008620.2-201ENST00000510294 1569 ntBASIC15.33■□□□□ 0.05
KRT9P35527 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC15.33■□□□□ 0.05
KRT9P35527 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KRT9P35527 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC15.33■□□□□ 0.04
KRT9P35527 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT9P35527 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT9P35527 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT9P35527 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
KRT9P35527 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
KRT9P35527 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.33■□□□□ 0.04
KRT9P35527 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.33■□□□□ 0.04
KRT9P35527 AC092580.1-201ENST00000433998 658 ntBASIC15.33■□□□□ 0.04
KRT9P35527 POM121L10P-201ENST00000436994 1285 ntBASIC15.33■□□□□ 0.04
KRT9P35527 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.33■□□□□ 0.04
KRT9P35527 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.33■□□□□ 0.04
KRT9P35527 SCARNA21-201ENST00000517026 139 ntBASIC15.33■□□□□ 0.04
KRT9P35527 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.33■□□□□ 0.04
KRT9P35527 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.33■□□□□ 0.04
KRT9P35527 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.33■□□□□ 0.04
KRT9P35527 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.33■□□□□ 0.04
KRT9P35527 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
KRT9P35527 TUBB1P2-201ENST00000422712 1306 ntBASIC15.33■□□□□ 0.04
KRT9P35527 TUBB1P1-201ENST00000503144 1300 ntBASIC15.33■□□□□ 0.04
KRT9P35527 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT9P35527 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC15.33■□□□□ 0.04
KRT9P35527 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.33■□□□□ 0.04
KRT9P35527 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.33■□□□□ 0.04
KRT9P35527 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT9P35527 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT9P35527 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
KRT9P35527 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT9P35527 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT9P35527 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT9P35527 AL358781.1-202ENST00000321081 1360 ntBASIC15.33■□□□□ 0.04
KRT9P35527 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.33■□□□□ 0.04
KRT9P35527 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT9P35527 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC15.33■□□□□ 0.04
KRT9P35527 OS9-206ENST00000435406 2346 ntTSL 2 BASIC15.33■□□□□ 0.04
KRT9P35527 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT9P35527 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT9P35527 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.33■□□□□ 0.04
KRT9P35527 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KRT9P35527 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KRT9P35527 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
KRT9P35527 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.33■□□□□ 0.04
KRT9P35527 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC15.33■□□□□ 0.04
KRT9P35527 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC15.33■□□□□ 0.04
KRT9P35527 GHET1-201ENST00000627071 1906 ntBASIC15.33■□□□□ 0.04
KRT9P35527 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
KRT9P35527 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC15.33■□□□□ 0.04
KRT9P35527 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
KRT9P35527 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC15.33■□□□□ 0.04
KRT9P35527 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.33■□□□□ 0.04
KRT9P35527 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT9P35527 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC15.32■□□□□ 0.04
KRT9P35527 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC15.32■□□□□ 0.04
KRT9P35527 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRT9P35527 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
KRT9P35527 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
KRT9P35527 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms