Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 TERF1P3-201ENST00000505638 1227 ntBASIC11.89□□□□□ -0.51
HIST1H1DP16402 HNRNPA1P36-201ENST00000521313 955 ntBASIC11.89□□□□□ -0.51
HIST1H1DP16402 FUZ-207ENST00000526575 482 ntTSL 4 BASIC11.89□□□□□ -0.51
HIST1H1DP16402 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H1DP16402 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC11.89□□□□□ -0.51
HIST1H1DP16402 AL096865.1-201ENST00000606796 927 ntBASIC11.89□□□□□ -0.51
HIST1H1DP16402 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC11.89□□□□□ -0.51
HIST1H1DP16402 AC015967.2-201ENST00000624092 234 ntBASIC11.89□□□□□ -0.51
HIST1H1DP16402 AC006435.4-201ENST00000625037 234 ntBASIC11.89□□□□□ -0.51
HIST1H1DP16402 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 AL356737.1-201ENST00000634391 234 ntBASIC11.89□□□□□ -0.51
HIST1H1DP16402 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC11.89□□□□□ -0.51
HIST1H1DP16402 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
HIST1H1DP16402 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC11.89□□□□□ -0.51
HIST1H1DP16402 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 AC008040.5-201ENST00000599781 1781 ntBASIC11.89□□□□□ -0.51
HIST1H1DP16402 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H1DP16402 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
HIST1H1DP16402 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H1DP16402 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 GOLGA2P5-201ENST00000266746 2395 ntBASIC11.89□□□□□ -0.51
HIST1H1DP16402 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
HIST1H1DP16402 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC11.89□□□□□ -0.51
HIST1H1DP16402 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 VENTXP1-201ENST00000569334 2716 ntBASIC11.88□□□□□ -0.51
HIST1H1DP16402 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 LINC01815-202ENST00000641468 1409 ntBASIC11.88□□□□□ -0.51
HIST1H1DP16402 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 AC092183.1-201ENST00000469884 875 ntBASIC11.88□□□□□ -0.51
HIST1H1DP16402 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 POLE2-203ENST00000553805 496 ntTSL 2 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 AL160314.3-201ENST00000556041 767 ntBASIC11.88□□□□□ -0.51
HIST1H1DP16402 BTNL10-201ENST00000595971 695 ntBASIC11.88□□□□□ -0.51
HIST1H1DP16402 AL356740.1-201ENST00000602192 1297 ntBASIC11.88□□□□□ -0.51
HIST1H1DP16402 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1DP16402 AL805961.2-201ENST00000642139 4817 ntBASIC11.88□□□□□ -0.51
HIST1H1DP16402 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
HIST1H1DP16402 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1DP16402 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
HIST1H1DP16402 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
HIST1H1DP16402 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC11.87□□□□□ -0.51
HIST1H1DP16402 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1DP16402 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1DP16402 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms