Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC11.46□□□□□ -0.58
DEFA4P12838 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC11.46□□□□□ -0.58
DEFA4P12838 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC11.46□□□□□ -0.58
DEFA4P12838 LCMT2-201ENST00000305641 6957 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
DEFA4P12838 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC11.46□□□□□ -0.58
DEFA4P12838 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
DEFA4P12838 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC11.46□□□□□ -0.58
DEFA4P12838 AC022497.1-201ENST00000624916 3691 ntBASIC11.46□□□□□ -0.58
DEFA4P12838 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
DEFA4P12838 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC11.45□□□□□ -0.58
DEFA4P12838 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 RNF125-201ENST00000217740 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
DEFA4P12838 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC11.45□□□□□ -0.58
DEFA4P12838 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC11.45□□□□□ -0.58
DEFA4P12838 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
DEFA4P12838 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
DEFA4P12838 OS9-206ENST00000435406 2346 ntTSL 2 BASIC11.45□□□□□ -0.58
DEFA4P12838 AL122018.1-201ENST00000446607 2310 ntBASIC11.45□□□□□ -0.58
DEFA4P12838 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 COPE-202ENST00000349893 948 ntTSL 2 BASIC11.45□□□□□ -0.58
DEFA4P12838 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 AK6-201ENST00000380818 1183 ntTSL 2 BASIC11.45□□□□□ -0.58
DEFA4P12838 AC010141.1-201ENST00000411585 623 ntBASIC11.45□□□□□ -0.58
DEFA4P12838 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC11.45□□□□□ -0.58
DEFA4P12838 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC11.45□□□□□ -0.58
DEFA4P12838 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC11.45□□□□□ -0.58
DEFA4P12838 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC11.45□□□□□ -0.58
DEFA4P12838 HIST2H2BB-201ENST00000449108 381 ntBASIC11.45□□□□□ -0.58
DEFA4P12838 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC11.45□□□□□ -0.58
DEFA4P12838 AC104989.1-201ENST00000519711 778 ntBASIC11.45□□□□□ -0.58
DEFA4P12838 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC11.45□□□□□ -0.58
DEFA4P12838 DUX4L46-201ENST00000566845 751 ntBASIC11.45□□□□□ -0.58
DEFA4P12838 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 AC009884.2-201ENST00000603110 324 ntBASIC11.45□□□□□ -0.58
DEFA4P12838 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC11.45□□□□□ -0.58
DEFA4P12838 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC11.45□□□□□ -0.58
DEFA4P12838 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC11.45□□□□□ -0.58
DEFA4P12838 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC11.45□□□□□ -0.58
DEFA4P12838 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC11.45□□□□□ -0.58
DEFA4P12838 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 AL022313.4-201ENST00000562756 2046 ntBASIC11.45□□□□□ -0.58
DEFA4P12838 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
DEFA4P12838 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
DEFA4P12838 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC11.44□□□□□ -0.58
DEFA4P12838 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
DEFA4P12838 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 AC004623.1-201ENST00000624592 2127 ntBASIC11.44□□□□□ -0.58
DEFA4P12838 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
DEFA4P12838 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC11.44□□□□□ -0.58
DEFA4P12838 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
DEFA4P12838 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC11.44□□□□□ -0.58
DEFA4P12838 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC11.44□□□□□ -0.58
DEFA4P12838 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
DEFA4P12838 AC079178.1-201ENST00000420915 656 ntBASIC11.44□□□□□ -0.58
DEFA4P12838 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC11.44□□□□□ -0.58
DEFA4P12838 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC11.44□□□□□ -0.58
DEFA4P12838 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
DEFA4P12838 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC11.44□□□□□ -0.58
DEFA4P12838 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC11.44□□□□□ -0.58
DEFA4P12838 CHMP1AP1-201ENST00000445563 662 ntBASIC11.44□□□□□ -0.58
DEFA4P12838 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC11.44□□□□□ -0.58
DEFA4P12838 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC11.44□□□□□ -0.58
DEFA4P12838 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms