Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RETP07949 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
RETP07949 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RETP07949 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RETP07949 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RETP07949 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RETP07949 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.08□□□□□ -0.16
RETP07949 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RETP07949 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RETP07949 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RETP07949 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RETP07949 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RETP07949 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RETP07949 PIFO-201ENST00000369737 746 ntTSL 2 BASIC14.08□□□□□ -0.16
RETP07949 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RETP07949 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC14.08□□□□□ -0.16
RETP07949 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
RETP07949 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RETP07949 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RETP07949 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC14.08□□□□□ -0.16
RETP07949 AC006987.1-201ENST00000413610 527 ntBASIC14.08□□□□□ -0.16
RETP07949 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC14.08□□□□□ -0.16
RETP07949 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC14.08□□□□□ -0.16
RETP07949 PPP1R2P4-201ENST00000424051 595 ntBASIC14.08□□□□□ -0.16
RETP07949 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC14.08□□□□□ -0.16
RETP07949 AC095040.1-201ENST00000513286 675 ntBASIC14.08□□□□□ -0.16
RETP07949 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC14.08□□□□□ -0.16
RETP07949 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC14.08□□□□□ -0.16
RETP07949 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC14.08□□□□□ -0.16
RETP07949 F11R-204ENST00000537746 1245 ntTSL 2 BASIC14.08□□□□□ -0.16
RETP07949 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC14.08□□□□□ -0.16
RETP07949 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC14.08□□□□□ -0.16
RETP07949 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC14.08□□□□□ -0.16
RETP07949 HNRNPA1P16-201ENST00000575692 955 ntBASIC14.08□□□□□ -0.16
RETP07949 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC14.08□□□□□ -0.16
RETP07949 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC14.08□□□□□ -0.16
RETP07949 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC14.08□□□□□ -0.16
RETP07949 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
RETP07949 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
RETP07949 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
RETP07949 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RETP07949 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RETP07949 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.08□□□□□ -0.16
RETP07949 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.08□□□□□ -0.16
RETP07949 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RETP07949 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RETP07949 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RETP07949 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RETP07949 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RETP07949 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RETP07949 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RETP07949 FKBP4P8-201ENST00000610931 1369 ntBASIC14.08□□□□□ -0.16
RETP07949 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RETP07949 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RETP07949 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.07□□□□□ -0.16
RETP07949 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.07□□□□□ -0.16
RETP07949 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RETP07949 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.07□□□□□ -0.16
RETP07949 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC14.07□□□□□ -0.16
RETP07949 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.07□□□□□ -0.16
RETP07949 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 LINC00265-2P-201ENST00000413372 782 ntBASIC14.07□□□□□ -0.16
RETP07949 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC14.07□□□□□ -0.16
RETP07949 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.07□□□□□ -0.16
RETP07949 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC14.07□□□□□ -0.16
RETP07949 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC14.07□□□□□ -0.16
RETP07949 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC14.07□□□□□ -0.16
RETP07949 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC14.07□□□□□ -0.16
RETP07949 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RETP07949 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.07□□□□□ -0.16
RETP07949 AC005777.1-201ENST00000588332 187 ntBASIC14.07□□□□□ -0.16
RETP07949 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RETP07949 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RETP07949 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.07□□□□□ -0.16
RETP07949 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RETP07949 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms