Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.91□□□□□ -0.02
O00370 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
O00370 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.91□□□□□ -0.02
O00370 SIGLEC18P-201ENST00000602271 909 ntBASIC14.91□□□□□ -0.02
O00370 AC007326.1-201ENST00000604539 458 ntBASIC14.91□□□□□ -0.02
O00370 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
O00370 AC009560.1-201ENST00000620208 434 ntBASIC14.91□□□□□ -0.02
O00370 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.91□□□□□ -0.02
O00370 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.91□□□□□ -0.02
O00370 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.91□□□□□ -0.02
O00370 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
O00370 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.91□□□□□ -0.02
O00370 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.91□□□□□ -0.02
O00370 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
O00370 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
O00370 KRT8P18-201ENST00000413425 1445 ntBASIC14.91□□□□□ -0.02
O00370 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.91□□□□□ -0.02
O00370 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
O00370 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
O00370 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
O00370 AC093462.1-201ENST00000621167 1683 ntBASIC14.9□□□□□ -0.02
O00370 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.9□□□□□ -0.02
O00370 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.9□□□□□ -0.02
O00370 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
O00370 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
O00370 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
O00370 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
O00370 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
O00370 AC004554.1-201ENST00000422830 1468 ntBASIC14.9□□□□□ -0.02
O00370 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
O00370 MARK2P9-201ENST00000430958 1727 ntBASIC14.9□□□□□ -0.02
O00370 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.9□□□□□ -0.02
O00370 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
O00370 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
O00370 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.9□□□□□ -0.02
O00370 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
O00370 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
O00370 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
O00370 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
O00370 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.9□□□□□ -0.02
O00370 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.9□□□□□ -0.02
O00370 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.9□□□□□ -0.02
O00370 IMP3P2-201ENST00000489760 475 ntBASIC14.9□□□□□ -0.02
O00370 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.9□□□□□ -0.02
O00370 KLF17P1-201ENST00000547105 1126 ntBASIC14.9□□□□□ -0.02
O00370 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
O00370 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
O00370 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.9□□□□□ -0.02
O00370 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.9□□□□□ -0.02
O00370 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.9□□□□□ -0.02
O00370 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.9□□□□□ -0.02
O00370 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.9□□□□□ -0.02
O00370 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
O00370 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.9□□□□□ -0.02
O00370 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
O00370 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
O00370 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.9□□□□□ -0.02
O00370 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
O00370 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
O00370 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.9□□□□□ -0.02
O00370 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.9□□□□□ -0.02
O00370 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
O00370 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.9□□□□□ -0.02
O00370 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.9□□□□□ -0.02
O00370 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
O00370 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
O00370 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
O00370 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
O00370 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
O00370 SALL4P6-201ENST00000429385 1691 ntBASIC14.9□□□□□ -0.02
O00370 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
O00370 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
O00370 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
O00370 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.9□□□□□ -0.02
O00370 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
O00370 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
O00370 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
O00370 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.89□□□□□ -0.03
O00370 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
O00370 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
O00370 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
O00370 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
O00370 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
O00370 MIR497HG-202ENST00000572453 3838 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms