Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 AC009955.4-201ENST00000597192 544 ntBASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 AL121894.2-201ENST00000602977 491 ntBASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 AC108024.1-201ENST00000626286 1721 ntBASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 AC102953.2-201ENST00000609755 3026 ntBASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 VENTXP1-201ENST00000569334 2716 ntBASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 SLC7A15P-201ENST00000424028 1363 ntBASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 AL022323.5-201ENST00000624101 2059 ntBASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 PCDHB17P-202ENST00000623466 3066 ntBASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 SALL4P6-201ENST00000429385 1691 ntBASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 LAP3P2-201ENST00000454686 1454 ntBASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 AL671883.3-201ENST00000603274 991 ntBASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 TMEM261P1-201ENST00000604899 340 ntBASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 ABBA01031660.1-201ENST00000635219 756 ntBASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 AC009093.2-202ENST00000620513 2079 ntBASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 AC022400.8-201ENST00000623453 3599 ntBASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC11.78□□□□□ -0.52
KCNIP3Q9Y2W7 AC020917.4-201ENST00000623994 1999 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms