Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 CYP46A4P-201ENST00000414953 267 ntBASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 AC073869.2-201ENST00000417338 1026 ntBASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 PHBP15-201ENST00000574228 665 ntBASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 HSPA8P9-201ENST00000485881 1943 ntBASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 ERG-211ENST00000453032 1595 ntTSL 2 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 FRMPD2B-201ENST00000431305 1347 ntBASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 ISCA2P1-201ENST00000425548 448 ntBASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 AC073150.1-201ENST00000450406 1084 ntBASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 MIR4326-201ENST00000582203 59 ntBASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 AL031673.1-201ENST00000611460 466 ntBASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO3Q9BXY4 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 AL157791.1-201ENST00000553667 1699 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms