Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.5□□□□□ -0.41
VRK1Q99986 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.5□□□□□ -0.41
VRK1Q99986 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
VRK1Q99986 AC131902.2-201ENST00000566892 2172 ntBASIC12.5□□□□□ -0.41
VRK1Q99986 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.5□□□□□ -0.41
VRK1Q99986 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
VRK1Q99986 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.5□□□□□ -0.41
VRK1Q99986 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
VRK1Q99986 PCDHB18P-202ENST00000526308 3197 ntBASIC12.5□□□□□ -0.41
VRK1Q99986 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.5□□□□□ -0.41
VRK1Q99986 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
VRK1Q99986 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VRK1Q99986 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.49□□□□□ -0.41
VRK1Q99986 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
VRK1Q99986 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.49□□□□□ -0.41
VRK1Q99986 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.49□□□□□ -0.41
VRK1Q99986 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
VRK1Q99986 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
VRK1Q99986 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
VRK1Q99986 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.49□□□□□ -0.41
VRK1Q99986 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.49□□□□□ -0.41
VRK1Q99986 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.49□□□□□ -0.41
VRK1Q99986 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.49□□□□□ -0.41
VRK1Q99986 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
VRK1Q99986 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
VRK1Q99986 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.49□□□□□ -0.41
VRK1Q99986 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.49□□□□□ -0.41
VRK1Q99986 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.49□□□□□ -0.41
VRK1Q99986 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.49□□□□□ -0.41
VRK1Q99986 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.49□□□□□ -0.41
VRK1Q99986 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 AL160314.3-201ENST00000556041 767 ntBASIC12.49□□□□□ -0.41
VRK1Q99986 MIR3619-201ENST00000579667 83 ntBASIC12.49□□□□□ -0.41
VRK1Q99986 AC091812.3-201ENST00000621362 345 ntBASIC12.49□□□□□ -0.41
VRK1Q99986 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.49□□□□□ -0.41
VRK1Q99986 Z98259.2-201ENST00000641583 609 ntBASIC12.49□□□□□ -0.41
VRK1Q99986 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.49□□□□□ -0.41
VRK1Q99986 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.49□□□□□ -0.41
VRK1Q99986 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.49□□□□□ -0.41
VRK1Q99986 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VRK1Q99986 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
VRK1Q99986 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.49□□□□□ -0.41
VRK1Q99986 AL365181.3-201ENST00000605886 3222 ntBASIC12.49□□□□□ -0.41
VRK1Q99986 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.48□□□□□ -0.41
VRK1Q99986 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.48□□□□□ -0.41
VRK1Q99986 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
VRK1Q99986 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.48□□□□□ -0.41
VRK1Q99986 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
VRK1Q99986 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.48□□□□□ -0.41
VRK1Q99986 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 AC111170.3-201ENST00000624282 2464 ntBASIC12.48□□□□□ -0.41
VRK1Q99986 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.48□□□□□ -0.41
VRK1Q99986 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.48□□□□□ -0.41
VRK1Q99986 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.48□□□□□ -0.41
VRK1Q99986 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.48□□□□□ -0.41
VRK1Q99986 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.48□□□□□ -0.41
VRK1Q99986 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC12.48□□□□□ -0.41
VRK1Q99986 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
VRK1Q99986 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.48□□□□□ -0.41
VRK1Q99986 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.48□□□□□ -0.41
VRK1Q99986 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.48□□□□□ -0.41
VRK1Q99986 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms