Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 AC009560.1-201ENST00000620208 434 ntBASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 AC008040.5-201ENST00000599781 1781 ntBASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 MIR769-201ENST00000390225 118 ntBASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 AL353637.1-201ENST00000451571 732 ntBASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 AL109837.1-201ENST00000603272 613 ntBASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 Z82170.1-201ENST00000625081 3192 ntBASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDLIM5Q96HC4 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 AC008132.1-202ENST00000342005 1389 ntBASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 AC106827.1-201ENST00000366454 431 ntBASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 PDIA3P2-201ENST00000428073 158 ntBASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms