Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 E2F3P2-201ENST00000447755 1422 ntBASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 AC061965.1-201ENST00000560524 1465 ntBASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 OR8S1-201ENST00000310194 1080 ntBASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 TISP43-201ENST00000409793 538 ntTSL 4 BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 AC239800.4-201ENST00000603712 296 ntBASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 AC026271.4-201ENST00000578214 1833 ntBASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 MSNP1-201ENST00000511640 1732 ntBASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 Z98257.2-202ENST00000641138 1548 ntBASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 TUBB4AP1-201ENST00000450755 1325 ntBASIC11.85□□□□□ -0.51
RTN4IP1Q8WWV3 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 AC115284.2-201ENST00000624646 2054 ntBASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms