Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 AC027237.1-201ENST00000560942 655 ntBASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 KRT18P8-201ENST00000581937 1246 ntBASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 AC005962.1-201ENST00000584100 773 ntBASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 AL162426.1-201ENST00000624141 743 ntBASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 TMBIM7P-202ENST00000641474 1516 ntBASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 HSPA8P5-201ENST00000456928 2069 ntBASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 AL157996.1-201ENST00000624684 2299 ntBASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 USP47-202ENST00000339865 7775 ntTSL 2 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 RBM8B-201ENST00000555532 525 ntBASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 AC009884.2-201ENST00000603110 324 ntBASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 AL008718.2-201ENST00000609206 1313 ntBASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 AC005695.3-201ENST00000614522 232 ntBASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms