Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SIGLEC22P-201ENST00000599104 714 ntBASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 COX6A1P2-201ENST00000620597 330 ntBASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 AC020910.6-201ENST00000623084 1459 ntBASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 HLA-DQB1-202ENST00000399079 1501 ntBASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 BX679664.3-201ENST00000414070 555 ntBASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 DNAJB1P1-201ENST00000429417 1024 ntBASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 AC098934.1-203ENST00000442868 1262 ntBASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 AC113935.1-201ENST00000471722 555 ntBASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 GOLGA2P8-201ENST00000505201 779 ntBASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 AL133467.4-201ENST00000602953 725 ntBASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 AC009560.1-201ENST00000620208 434 ntBASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM48Q8IWZ4 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 MIR33B-201ENST00000385104 96 ntBASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRIM48Q8IWZ4 AC069218.1-201ENST00000435269 762 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms