Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 AC087386.2-201ENST00000623212 4637 ntBASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 AL157996.1-201ENST00000624684 2299 ntBASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 MIR33B-201ENST00000385104 96 ntBASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 HMGA1P1-201ENST00000415560 1062 ntBASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 AC069218.1-201ENST00000435269 762 ntBASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 KRT18P15-201ENST00000458108 1291 ntBASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 RPL18AP8-201ENST00000486071 528 ntBASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 AL133467.4-201ENST00000602953 725 ntBASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 AC005632.3-201ENST00000605544 308 ntBASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 AL805961.1-201ENST00000642026 753 ntBASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFWD3Q6PCD5 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 AC092506.1-202ENST00000401022 528 ntBASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 AL627422.1-201ENST00000434104 580 ntBASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 NDUFB10P1-201ENST00000567319 521 ntBASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms