Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RFTN2Q52LD8 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.49□□□□□ -0.25
RFTN2Q52LD8 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.49□□□□□ -0.25
RFTN2Q52LD8 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RFTN2Q52LD8 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFTN2Q52LD8 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFTN2Q52LD8 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFTN2Q52LD8 AP000437.1-201ENST00000624057 2085 ntBASIC13.49□□□□□ -0.25
RFTN2Q52LD8 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFTN2Q52LD8 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFTN2Q52LD8 AC073862.5-201ENST00000624129 2027 ntBASIC13.49□□□□□ -0.25
RFTN2Q52LD8 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.49□□□□□ -0.25
RFTN2Q52LD8 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.49□□□□□ -0.25
RFTN2Q52LD8 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.49□□□□□ -0.25
RFTN2Q52LD8 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RFTN2Q52LD8 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFTN2Q52LD8 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFTN2Q52LD8 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RFTN2Q52LD8 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFTN2Q52LD8 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 AC024075.2-201ENST00000598112 1473 ntBASIC13.48□□□□□ -0.25
RFTN2Q52LD8 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 ZNF493-208ENST00000599461 1769 ntBASIC13.48□□□□□ -0.25
RFTN2Q52LD8 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 AC104758.3-203ENST00000562938 2123 ntBASIC13.48□□□□□ -0.25
RFTN2Q52LD8 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 AC115284.2-201ENST00000624646 2054 ntBASIC13.48□□□□□ -0.25
RFTN2Q52LD8 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 AC104073.2-201ENST00000453737 312 ntBASIC13.48□□□□□ -0.25
RFTN2Q52LD8 RN7SL277P-201ENST00000481521 288 ntBASIC13.48□□□□□ -0.25
RFTN2Q52LD8 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 AP005482.1-201ENST00000563722 1273 ntBASIC13.48□□□□□ -0.25
RFTN2Q52LD8 MIR3615-201ENST00000581999 87 ntBASIC13.48□□□□□ -0.25
RFTN2Q52LD8 MIR4259-201ENST00000584466 101 ntBASIC13.48□□□□□ -0.25
RFTN2Q52LD8 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 AC090164.2-201ENST00000611487 516 ntBASIC13.48□□□□□ -0.25
RFTN2Q52LD8 AC068587.8-201ENST00000641239 219 ntBASIC13.48□□□□□ -0.25
RFTN2Q52LD8 AC004923.1-202ENST00000642106 209 ntBASIC13.48□□□□□ -0.25
RFTN2Q52LD8 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 AP003969.2-201ENST00000623739 2275 ntBASIC13.48□□□□□ -0.25
RFTN2Q52LD8 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFTN2Q52LD8 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 AL358781.1-202ENST00000321081 1360 ntBASIC13.47□□□□□ -0.25
RFTN2Q52LD8 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RFTN2Q52LD8 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms