Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 AC092115.1-201ENST00000566277 1402 ntBASIC18.8■□□□□ 0.6
CGNL1Q0VF96 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 NHP2-202ENST00000314397 599 ntTSL 2 BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 KRT18P37-201ENST00000520711 1282 ntBASIC18.8■□□□□ 0.6
CGNL1Q0VF96 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 AC011247.3-201ENST00000603297 438 ntBASIC18.8■□□□□ 0.6
CGNL1Q0VF96 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 AC023794.5-201ENST00000564380 2157 ntBASIC18.8■□□□□ 0.6
CGNL1Q0VF96 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CGNL1Q0VF96 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 AC079250.1-201ENST00000456046 531 ntBASIC18.79■□□□□ 0.6
CGNL1Q0VF96 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 AC008026.2-201ENST00000495438 348 ntBASIC18.79■□□□□ 0.6
CGNL1Q0VF96 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 CD44-224ENST00000526669 870 ntTSL 5 BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 MT3-202ENST00000561640 514 ntTSL 3 BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC18.79■□□□□ 0.6
CGNL1Q0VF96 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 IDS-203ENST00000428056 1213 ntTSL 2 BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 GULOP-201ENST00000454030 748 ntBASIC18.78■□□□□ 0.6
CGNL1Q0VF96 PFN2-212ENST00000490975 858 ntTSL 4 BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 AC093909.3-201ENST00000504783 336 ntBASIC18.78■□□□□ 0.6
CGNL1Q0VF96 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 RN7SL596P-201ENST00000582123 288 ntBASIC18.78■□□□□ 0.6
CGNL1Q0VF96 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 AL136982.5-201ENST00000605222 294 ntBASIC18.78■□□□□ 0.6
CGNL1Q0VF96 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms