Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC16.36■□□□□ 0.21
IRX3P78415 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IRX3P78415 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
IRX3P78415 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX3P78415 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IRX3P78415 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.36■□□□□ 0.21
IRX3P78415 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.36■□□□□ 0.21
IRX3P78415 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX3P78415 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
IRX3P78415 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX3P78415 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX3P78415 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX3P78415 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC16.36■□□□□ 0.21
IRX3P78415 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC16.36■□□□□ 0.21
IRX3P78415 FUCA1P1-201ENST00000374476 1351 ntBASIC16.36■□□□□ 0.21
IRX3P78415 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX3P78415 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.36■□□□□ 0.21
IRX3P78415 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX3P78415 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX3P78415 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX3P78415 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC16.35■□□□□ 0.21
IRX3P78415 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
IRX3P78415 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC16.35■□□□□ 0.21
IRX3P78415 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX3P78415 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IRX3P78415 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IRX3P78415 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX3P78415 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC16.35■□□□□ 0.21
IRX3P78415 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
IRX3P78415 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IRX3P78415 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IRX3P78415 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IRX3P78415 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX3P78415 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
IRX3P78415 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.35■□□□□ 0.21
IRX3P78415 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX3P78415 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IRX3P78415 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX3P78415 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IRX3P78415 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
IRX3P78415 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
IRX3P78415 AC092573.1-201ENST00000433054 884 ntBASIC16.35■□□□□ 0.21
IRX3P78415 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC16.35■□□□□ 0.21
IRX3P78415 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IRX3P78415 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.35■□□□□ 0.21
IRX3P78415 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.35■□□□□ 0.21
IRX3P78415 TREHP1-201ENST00000531328 465 ntBASIC16.35■□□□□ 0.21
IRX3P78415 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC16.35■□□□□ 0.21
IRX3P78415 GOLGA2P7-209ENST00000560408 745 ntBASIC16.35■□□□□ 0.21
IRX3P78415 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC16.35■□□□□ 0.21
IRX3P78415 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC16.35■□□□□ 0.21
IRX3P78415 AP005212.2-201ENST00000584979 510 ntBASIC16.35■□□□□ 0.21
IRX3P78415 AC010632.2-201ENST00000588369 1224 ntBASIC16.35■□□□□ 0.21
IRX3P78415 AC008972.2-201ENST00000606587 494 ntBASIC16.35■□□□□ 0.21
IRX3P78415 HPX-213ENST00000615166 826 ntTSL 5 BASIC16.35■□□□□ 0.21
IRX3P78415 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX3P78415 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC16.35■□□□□ 0.21
IRX3P78415 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
IRX3P78415 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
IRX3P78415 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IRX3P78415 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
IRX3P78415 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IRX3P78415 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
IRX3P78415 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC16.35■□□□□ 0.21
IRX3P78415 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16.35■□□□□ 0.21
IRX3P78415 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX3P78415 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
IRX3P78415 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
IRX3P78415 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX3P78415 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX3P78415 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX3P78415 INVS-201ENST00000262456 2968 ntTSL 5 BASIC16.35■□□□□ 0.21
IRX3P78415 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
IRX3P78415 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX3P78415 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.34■□□□□ 0.21
IRX3P78415 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.34■□□□□ 0.21
IRX3P78415 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX3P78415 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX3P78415 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IRX3P78415 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
IRX3P78415 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
IRX3P78415 EML1-203ENST00000334192 4064 ntTSL 5 BASIC16.34■□□□□ 0.21
IRX3P78415 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX3P78415 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC16.34■□□□□ 0.21
IRX3P78415 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX3P78415 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IRX3P78415 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
IRX3P78415 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX3P78415 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IRX3P78415 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX3P78415 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
IRX3P78415 COX20P1-201ENST00000366529 357 ntBASIC16.34■□□□□ 0.21
IRX3P78415 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
IRX3P78415 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX3P78415 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX3P78415 OR51A9P-201ENST00000422578 911 ntBASIC16.34■□□□□ 0.21
IRX3P78415 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC16.34■□□□□ 0.21
IRX3P78415 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IRX3P78415 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
IRX3P78415 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms