Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 AC091181.1-201ENST00000623762 2098 ntBASIC12.56□□□□□ -0.4
VBP1P61758 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 C14orf159-219ENST00000521077 2719 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
VBP1P61758 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
VBP1P61758 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
VBP1P61758 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.56□□□□□ -0.4
VBP1P61758 NLRP7-202ENST00000340844 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VBP1P61758 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC12.55□□□□□ -0.4
VBP1P61758 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC12.55□□□□□ -0.4
VBP1P61758 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.55□□□□□ -0.4
VBP1P61758 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.55□□□□□ -0.4
VBP1P61758 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.55□□□□□ -0.4
VBP1P61758 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.55□□□□□ -0.4
VBP1P61758 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 MESTP3-201ENST00000503460 968 ntBASIC12.55□□□□□ -0.4
VBP1P61758 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.55□□□□□ -0.4
VBP1P61758 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.55□□□□□ -0.4
VBP1P61758 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
VBP1P61758 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 Z98885.3-201ENST00000624882 1757 ntBASIC12.55□□□□□ -0.4
VBP1P61758 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 FKBP4P6-201ENST00000457486 1332 ntBASIC12.55□□□□□ -0.4
VBP1P61758 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.55□□□□□ -0.4
VBP1P61758 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC12.55□□□□□ -0.4
VBP1P61758 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
VBP1P61758 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
VBP1P61758 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
VBP1P61758 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.55□□□□□ -0.4
VBP1P61758 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VBP1P61758 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.54□□□□□ -0.4
VBP1P61758 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.54□□□□□ -0.4
VBP1P61758 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.54□□□□□ -0.4
VBP1P61758 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 LINC00563-201ENST00000566370 1400 ntBASIC12.54□□□□□ -0.4
VBP1P61758 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
VBP1P61758 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
VBP1P61758 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.54□□□□□ -0.4
VBP1P61758 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC12.54□□□□□ -0.4
VBP1P61758 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
VBP1P61758 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
VBP1P61758 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC12.54□□□□□ -0.4
VBP1P61758 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
VBP1P61758 DZIP1L-201ENST00000327532 3493 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
VBP1P61758 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC12.54□□□□□ -0.4
VBP1P61758 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 HMGA1P1-201ENST00000415560 1062 ntBASIC12.54□□□□□ -0.4
VBP1P61758 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.54□□□□□ -0.4
VBP1P61758 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.54□□□□□ -0.4
VBP1P61758 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 AC009078.2-202ENST00000463353 338 ntBASIC12.54□□□□□ -0.4
VBP1P61758 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.54□□□□□ -0.4
VBP1P61758 ZNF890P-202ENST00000530367 1156 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms