Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1EP49674 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1EP49674 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1EP49674 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1EP49674 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1EP49674 SALL4P6-201ENST00000429385 1691 ntBASIC13.62□□□□□ -0.23
CSNK1EP49674 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1EP49674 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1EP49674 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1EP49674 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1EP49674 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.62□□□□□ -0.23
CSNK1EP49674 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1EP49674 ENPP7P8-202ENST00000527856 1345 ntBASIC13.62□□□□□ -0.23
CSNK1EP49674 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1EP49674 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1EP49674 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.62□□□□□ -0.23
CSNK1EP49674 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1EP49674 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.61□□□□□ -0.23
CSNK1EP49674 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1EP49674 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1EP49674 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1EP49674 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1EP49674 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1EP49674 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CSNK1EP49674 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1EP49674 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.61□□□□□ -0.23
CSNK1EP49674 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CSNK1EP49674 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1EP49674 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
CSNK1EP49674 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1EP49674 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1EP49674 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1EP49674 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1EP49674 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CSNK1EP49674 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CSNK1EP49674 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1EP49674 AC106827.1-201ENST00000366454 431 ntBASIC13.61□□□□□ -0.23
CSNK1EP49674 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC13.61□□□□□ -0.23
CSNK1EP49674 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1EP49674 RPL10-203ENST00000406022 748 ntTSL 3 BASIC13.61□□□□□ -0.23
CSNK1EP49674 IFNWP2-201ENST00000431203 580 ntBASIC13.61□□□□□ -0.23
CSNK1EP49674 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CSNK1EP49674 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC13.61□□□□□ -0.23
CSNK1EP49674 AC025594.1-201ENST00000469533 543 ntBASIC13.61□□□□□ -0.23
CSNK1EP49674 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC13.61□□□□□ -0.23
CSNK1EP49674 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC13.61□□□□□ -0.23
CSNK1EP49674 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1EP49674 CD44-224ENST00000526669 870 ntTSL 5 BASIC13.61□□□□□ -0.23
CSNK1EP49674 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC13.61□□□□□ -0.23
CSNK1EP49674 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC13.61□□□□□ -0.23
CSNK1EP49674 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1EP49674 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1EP49674 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1EP49674 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.61□□□□□ -0.23
CSNK1EP49674 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1EP49674 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.61□□□□□ -0.23
CSNK1EP49674 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CSNK1EP49674 AL137784.3-201ENST00000623858 2288 ntBASIC13.61□□□□□ -0.23
CSNK1EP49674 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.61□□□□□ -0.23
CSNK1EP49674 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CSNK1EP49674 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1EP49674 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.61□□□□□ -0.23
CSNK1EP49674 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1EP49674 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC13.61□□□□□ -0.23
CSNK1EP49674 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CSNK1EP49674 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.61□□□□□ -0.23
CSNK1EP49674 Z98885.3-201ENST00000624882 1757 ntBASIC13.6□□□□□ -0.23
CSNK1EP49674 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1EP49674 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.6□□□□□ -0.23
CSNK1EP49674 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1EP49674 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.6□□□□□ -0.23
CSNK1EP49674 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1EP49674 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CSNK1EP49674 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CSNK1EP49674 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1EP49674 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
CSNK1EP49674 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1EP49674 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1EP49674 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1EP49674 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1EP49674 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.6□□□□□ -0.23
CSNK1EP49674 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1EP49674 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1EP49674 SIRPB3P-201ENST00000340424 1216 ntBASIC13.6□□□□□ -0.23
CSNK1EP49674 U3.5-201ENST00000363448 216 ntBASIC13.6□□□□□ -0.23
CSNK1EP49674 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.6□□□□□ -0.23
CSNK1EP49674 AC104212.2-201ENST00000478813 628 ntBASIC13.6□□□□□ -0.23
CSNK1EP49674 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC13.6□□□□□ -0.23
CSNK1EP49674 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1EP49674 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1EP49674 AC015802.1-201ENST00000588104 1449 ntBASIC13.6□□□□□ -0.23
CSNK1EP49674 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.6□□□□□ -0.23
CSNK1EP49674 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC13.6□□□□□ -0.23
CSNK1EP49674 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1EP49674 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.6□□□□□ -0.23
CSNK1EP49674 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC13.6□□□□□ -0.23
CSNK1EP49674 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1EP49674 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1EP49674 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CSNK1EP49674 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms