Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
TNNI2P48788 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNNI2P48788 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
TNNI2P48788 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TNNI2P48788 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNNI2P48788 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC16.52■□□□□ 0.24
TNNI2P48788 NME6-208ENST00000435684 599 ntTSL 2 BASIC16.52■□□□□ 0.24
TNNI2P48788 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC16.52■□□□□ 0.24
TNNI2P48788 GULOP-201ENST00000454030 748 ntBASIC16.52■□□□□ 0.24
TNNI2P48788 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC16.52■□□□□ 0.24
TNNI2P48788 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TNNI2P48788 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TNNI2P48788 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TNNI2P48788 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TNNI2P48788 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TNNI2P48788 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TNNI2P48788 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TNNI2P48788 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.52■□□□□ 0.23
TNNI2P48788 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.52■□□□□ 0.23
TNNI2P48788 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC16.52■□□□□ 0.23
TNNI2P48788 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
TNNI2P48788 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TNNI2P48788 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TNNI2P48788 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNNI2P48788 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TNNI2P48788 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
TNNI2P48788 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TNNI2P48788 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.51■□□□□ 0.23
TNNI2P48788 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC16.51■□□□□ 0.23
TNNI2P48788 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNNI2P48788 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
TNNI2P48788 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TNNI2P48788 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNNI2P48788 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNNI2P48788 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNNI2P48788 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNNI2P48788 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TNNI2P48788 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.51■□□□□ 0.23
TNNI2P48788 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TNNI2P48788 HSPA8P5-201ENST00000456928 2069 ntBASIC16.51■□□□□ 0.23
TNNI2P48788 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNNI2P48788 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TNNI2P48788 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC16.51■□□□□ 0.23
TNNI2P48788 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TNNI2P48788 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC16.51■□□□□ 0.23
TNNI2P48788 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.51■□□□□ 0.23
TNNI2P48788 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TNNI2P48788 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC16.51■□□□□ 0.23
TNNI2P48788 NALT1-202ENST00000450304 437 ntTSL 3 BASIC16.51■□□□□ 0.23
TNNI2P48788 TBC1D3P6-201ENST00000505954 962 ntBASIC16.51■□□□□ 0.23
TNNI2P48788 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TNNI2P48788 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TNNI2P48788 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC16.51■□□□□ 0.23
TNNI2P48788 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC16.51■□□□□ 0.23
TNNI2P48788 MIR8071-1-201ENST00000616769 65 ntBASIC16.51■□□□□ 0.23
TNNI2P48788 MIR8071-2-201ENST00000616772 65 ntBASIC16.51■□□□□ 0.23
TNNI2P48788 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TNNI2P48788 RARS-210ENST00000626454 177 ntTSL 5 BASIC16.51■□□□□ 0.23
TNNI2P48788 GARS-210ENST00000627489 324 ntTSL 4 BASIC16.51■□□□□ 0.23
TNNI2P48788 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TNNI2P48788 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNNI2P48788 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.51■□□□□ 0.23
TNNI2P48788 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TNNI2P48788 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TNNI2P48788 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNNI2P48788 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNNI2P48788 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
TNNI2P48788 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TNNI2P48788 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TNNI2P48788 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TNNI2P48788 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNNI2P48788 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TNNI2P48788 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.51■□□□□ 0.23
TNNI2P48788 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TNNI2P48788 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TNNI2P48788 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TNNI2P48788 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TNNI2P48788 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC16.5■□□□□ 0.23
TNNI2P48788 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNNI2P48788 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNNI2P48788 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNNI2P48788 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNNI2P48788 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNNI2P48788 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.5■□□□□ 0.23
TNNI2P48788 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.5■□□□□ 0.23
TNNI2P48788 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TNNI2P48788 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNNI2P48788 RHOC-205ENST00000369636 786 ntTSL 2 BASIC16.5■□□□□ 0.23
TNNI2P48788 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TNNI2P48788 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC16.5■□□□□ 0.23
TNNI2P48788 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TNNI2P48788 HNRNPA1P58-201ENST00000403629 610 ntBASIC16.5■□□□□ 0.23
TNNI2P48788 RPL10-203ENST00000406022 748 ntTSL 3 BASIC16.5■□□□□ 0.23
TNNI2P48788 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNNI2P48788 ACTBP7-201ENST00000418351 1124 ntBASIC16.5■□□□□ 0.23
TNNI2P48788 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNNI2P48788 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNNI2P48788 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNNI2P48788 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC16.5■□□□□ 0.23
TNNI2P48788 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms