Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1DP48730 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1DP48730 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.92□□□□□ -0.18
CSNK1DP48730 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.92□□□□□ -0.18
CSNK1DP48730 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CSNK1DP48730 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.92□□□□□ -0.18
CSNK1DP48730 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.92□□□□□ -0.18
CSNK1DP48730 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
CSNK1DP48730 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.92□□□□□ -0.18
CSNK1DP48730 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.92□□□□□ -0.18
CSNK1DP48730 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC13.92□□□□□ -0.18
CSNK1DP48730 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CSNK1DP48730 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC13.92□□□□□ -0.18
CSNK1DP48730 OR7E115P-201ENST00000382617 1024 ntBASIC13.92□□□□□ -0.18
CSNK1DP48730 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC13.92□□□□□ -0.18
CSNK1DP48730 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC13.92□□□□□ -0.18
CSNK1DP48730 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC13.92□□□□□ -0.18
CSNK1DP48730 AC135782.3-201ENST00000562782 2105 ntBASIC13.92□□□□□ -0.18
CSNK1DP48730 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC13.92□□□□□ -0.18
CSNK1DP48730 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC13.92□□□□□ -0.18
CSNK1DP48730 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.92□□□□□ -0.18
CSNK1DP48730 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC13.92□□□□□ -0.18
CSNK1DP48730 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC13.92□□□□□ -0.18
CSNK1DP48730 MIR6858-201ENST00000620733 67 ntBASIC13.92□□□□□ -0.18
CSNK1DP48730 AC073911.3-201ENST00000624401 631 ntBASIC13.92□□□□□ -0.18
CSNK1DP48730 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CSNK1DP48730 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC13.92□□□□□ -0.18
CSNK1DP48730 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.92□□□□□ -0.18
CSNK1DP48730 AC090502.4-201ENST00000551714 1386 ntBASIC13.92□□□□□ -0.18
CSNK1DP48730 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
CSNK1DP48730 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.92□□□□□ -0.18
CSNK1DP48730 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC13.92□□□□□ -0.18
CSNK1DP48730 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.92□□□□□ -0.18
CSNK1DP48730 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CSNK1DP48730 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CSNK1DP48730 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CSNK1DP48730 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1DP48730 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CSNK1DP48730 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1DP48730 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1DP48730 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.91□□□□□ -0.18
CSNK1DP48730 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1DP48730 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
CSNK1DP48730 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CSNK1DP48730 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CSNK1DP48730 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CSNK1DP48730 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
CSNK1DP48730 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1DP48730 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1DP48730 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
CSNK1DP48730 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CSNK1DP48730 AC108024.1-201ENST00000626286 1721 ntBASIC13.91□□□□□ -0.18
CSNK1DP48730 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1DP48730 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1DP48730 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1DP48730 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1DP48730 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
CSNK1DP48730 ABCD1P4-201ENST00000399687 604 ntBASIC13.91□□□□□ -0.18
CSNK1DP48730 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1DP48730 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC13.91□□□□□ -0.18
CSNK1DP48730 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC13.91□□□□□ -0.18
CSNK1DP48730 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC13.91□□□□□ -0.18
CSNK1DP48730 AC008267.1-201ENST00000474858 1069 ntBASIC13.91□□□□□ -0.18
CSNK1DP48730 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC13.91□□□□□ -0.18
CSNK1DP48730 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC13.91□□□□□ -0.18
CSNK1DP48730 AP003398.1-201ENST00000531124 318 ntBASIC13.91□□□□□ -0.18
CSNK1DP48730 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC13.91□□□□□ -0.18
CSNK1DP48730 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC13.91□□□□□ -0.18
CSNK1DP48730 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC13.91□□□□□ -0.18
CSNK1DP48730 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CSNK1DP48730 MIR8071-1-201ENST00000616769 65 ntBASIC13.91□□□□□ -0.18
CSNK1DP48730 MIR8071-2-201ENST00000616772 65 ntBASIC13.91□□□□□ -0.18
CSNK1DP48730 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC13.91□□□□□ -0.18
CSNK1DP48730 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms