Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOBEC1P41238 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.65□□□□□ -0.38
APOBEC1P41238 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOBEC1P41238 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOBEC1P41238 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOBEC1P41238 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
APOBEC1P41238 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOBEC1P41238 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
APOBEC1P41238 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
APOBEC1P41238 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.65□□□□□ -0.38
APOBEC1P41238 AL359845.1-201ENST00000458202 1648 ntBASIC12.65□□□□□ -0.38
APOBEC1P41238 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOBEC1P41238 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
APOBEC1P41238 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOBEC1P41238 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
APOBEC1P41238 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
APOBEC1P41238 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
APOBEC1P41238 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
APOBEC1P41238 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.65□□□□□ -0.39
APOBEC1P41238 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOBEC1P41238 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
APOBEC1P41238 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
APOBEC1P41238 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
APOBEC1P41238 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOBEC1P41238 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.64□□□□□ -0.39
APOBEC1P41238 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
APOBEC1P41238 MEX3B-202ENST00000558133 4333 ntBASIC12.64□□□□□ -0.39
APOBEC1P41238 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOBEC1P41238 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOBEC1P41238 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
APOBEC1P41238 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOBEC1P41238 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOBEC1P41238 OR2K2-202ENST00000374428 1038 ntBASIC12.64□□□□□ -0.39
APOBEC1P41238 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOBEC1P41238 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.64□□□□□ -0.39
APOBEC1P41238 AC007274.2-201ENST00000421675 662 ntBASIC12.64□□□□□ -0.39
APOBEC1P41238 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOBEC1P41238 RN7SL788P-201ENST00000460504 316 ntBASIC12.64□□□□□ -0.39
APOBEC1P41238 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOBEC1P41238 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.64□□□□□ -0.39
APOBEC1P41238 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
APOBEC1P41238 MIR3677-201ENST00000578964 60 ntBASIC12.64□□□□□ -0.39
APOBEC1P41238 SIGLEC22P-201ENST00000599104 714 ntBASIC12.64□□□□□ -0.39
APOBEC1P41238 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.64□□□□□ -0.39
APOBEC1P41238 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.64□□□□□ -0.39
APOBEC1P41238 AL356740.1-201ENST00000602192 1297 ntBASIC12.64□□□□□ -0.39
APOBEC1P41238 AC006453.1-201ENST00000636037 1257 ntBASIC12.64□□□□□ -0.39
APOBEC1P41238 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOBEC1P41238 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
APOBEC1P41238 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOBEC1P41238 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOBEC1P41238 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOBEC1P41238 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.64□□□□□ -0.39
APOBEC1P41238 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOBEC1P41238 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOBEC1P41238 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOBEC1P41238 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.64□□□□□ -0.39
APOBEC1P41238 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOBEC1P41238 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOBEC1P41238 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.64□□□□□ -0.39
APOBEC1P41238 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.64□□□□□ -0.39
APOBEC1P41238 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOBEC1P41238 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOBEC1P41238 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.64□□□□□ -0.39
APOBEC1P41238 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
APOBEC1P41238 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
APOBEC1P41238 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOBEC1P41238 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOBEC1P41238 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOBEC1P41238 AL365181.3-201ENST00000605886 3222 ntBASIC12.64□□□□□ -0.39
APOBEC1P41238 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.64□□□□□ -0.39
APOBEC1P41238 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
APOBEC1P41238 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
APOBEC1P41238 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
APOBEC1P41238 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.63□□□□□ -0.39
APOBEC1P41238 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.63□□□□□ -0.39
APOBEC1P41238 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.63□□□□□ -0.39
APOBEC1P41238 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.63□□□□□ -0.39
APOBEC1P41238 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
APOBEC1P41238 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.63□□□□□ -0.39
APOBEC1P41238 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.63□□□□□ -0.39
APOBEC1P41238 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
APOBEC1P41238 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.63□□□□□ -0.39
APOBEC1P41238 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
APOBEC1P41238 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOBEC1P41238 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms