Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA3P32297 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA3P32297 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA3P32297 AC108024.1-201ENST00000626286 1721 ntBASIC14.8□□□□□ -0.04
CHRNA3P32297 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNA3P32297 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CHRNA3P32297 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CHRNA3P32297 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA3P32297 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA3P32297 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA3P32297 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA3P32297 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CHRNA3P32297 AC103592.1-201ENST00000394513 664 ntBASIC14.8□□□□□ -0.04
CHRNA3P32297 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.8□□□□□ -0.04
CHRNA3P32297 AC006122.1-201ENST00000493323 440 ntBASIC14.8□□□□□ -0.04
CHRNA3P32297 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.8□□□□□ -0.04
CHRNA3P32297 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNA3P32297 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.8□□□□□ -0.04
CHRNA3P32297 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.8□□□□□ -0.04
CHRNA3P32297 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
CHRNA3P32297 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
CHRNA3P32297 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA3P32297 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNA3P32297 AC090386.2-201ENST00000623010 1039 ntBASIC14.8□□□□□ -0.04
CHRNA3P32297 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA3P32297 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CHRNA3P32297 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA3P32297 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA3P32297 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA3P32297 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA3P32297 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.8□□□□□ -0.04
CHRNA3P32297 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA3P32297 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNA3P32297 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA3P32297 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA3P32297 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA3P32297 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA3P32297 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA3P32297 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA3P32297 AC010970.1-201ENST00000445125 1848 ntBASIC14.8□□□□□ -0.04
CHRNA3P32297 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNA3P32297 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA3P32297 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA3P32297 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNA3P32297 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.8□□□□□ -0.04
CHRNA3P32297 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.8□□□□□ -0.04
CHRNA3P32297 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNA3P32297 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
CHRNA3P32297 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CHRNA3P32297 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 RN7SKP214-201ENST00000364208 315 ntBASIC14.79□□□□□ -0.04
CHRNA3P32297 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.79□□□□□ -0.04
CHRNA3P32297 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNA3P32297 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNA3P32297 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNA3P32297 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.79□□□□□ -0.04
CHRNA3P32297 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNA3P32297 RN7SL11P-201ENST00000471305 293 ntBASIC14.79□□□□□ -0.04
CHRNA3P32297 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.79□□□□□ -0.04
CHRNA3P32297 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.79□□□□□ -0.04
CHRNA3P32297 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.79□□□□□ -0.04
CHRNA3P32297 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNA3P32297 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.79□□□□□ -0.04
CHRNA3P32297 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.79□□□□□ -0.04
CHRNA3P32297 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNA3P32297 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.79□□□□□ -0.04
CHRNA3P32297 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.79□□□□□ -0.04
CHRNA3P32297 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNA3P32297 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 Z82170.1-201ENST00000625081 3192 ntBASIC14.79□□□□□ -0.04
CHRNA3P32297 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
CHRNA3P32297 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CHRNA3P32297 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CHRNA3P32297 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CHRNA3P32297 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNA3P32297 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA3P32297 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.78□□□□□ -0.04
CHRNA3P32297 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms