Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 CLPP-204ENST00000596149 745 ntTSL 2 BASIC17.67■□□□□ 0.42
RXRBP28702 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RXRBP28702 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RXRBP28702 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC17.67■□□□□ 0.42
RXRBP28702 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RXRBP28702 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RXRBP28702 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC17.67■□□□□ 0.42
RXRBP28702 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RXRBP28702 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RXRBP28702 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC17.67■□□□□ 0.42
RXRBP28702 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RXRBP28702 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.67■□□□□ 0.42
RXRBP28702 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RXRBP28702 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RXRBP28702 ARHGAP23P1-201ENST00000562773 1937 ntBASIC17.66■□□□□ 0.42
RXRBP28702 SLC25A19-204ENST00000416858 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RXRBP28702 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RXRBP28702 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
RXRBP28702 AL354702.1-201ENST00000442006 1960 ntBASIC17.66■□□□□ 0.42
RXRBP28702 NFKBIA-208ENST00000557140 1400 ntTSL 5 BASIC17.66■□□□□ 0.42
RXRBP28702 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RXRBP28702 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC17.66■□□□□ 0.42
RXRBP28702 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RXRBP28702 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RXRBP28702 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RXRBP28702 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RXRBP28702 THYN1-202ENST00000352327 835 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RXRBP28702 S100B-202ENST00000367071 971 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RXRBP28702 HSPB11-204ENST00000371378 894 ntTSL 3 BASIC17.66■□□□□ 0.42
RXRBP28702 OR2T32P-201ENST00000403423 963 ntBASIC17.66■□□□□ 0.42
RXRBP28702 MED20-204ENST00000409312 932 ntTSL 2 BASIC17.66■□□□□ 0.42
RXRBP28702 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC17.66■□□□□ 0.42
RXRBP28702 MTND6P7-201ENST00000433237 524 ntBASIC17.66■□□□□ 0.42
RXRBP28702 CDCA4P3-201ENST00000442572 689 ntBASIC17.66■□□□□ 0.42
RXRBP28702 AL356479.1-202ENST00000456933 714 ntTSL 3 BASIC17.66■□□□□ 0.42
RXRBP28702 PRAMEF35P-201ENST00000458709 891 ntBASIC17.66■□□□□ 0.42
RXRBP28702 RN7SL559P-201ENST00000476501 297 ntBASIC17.66■□□□□ 0.42
RXRBP28702 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC17.66■□□□□ 0.42
RXRBP28702 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC17.66■□□□□ 0.42
RXRBP28702 MIR1914-201ENST00000607800 80 ntBASIC17.66■□□□□ 0.42
RXRBP28702 AC108002.3-201ENST00000612629 503 ntTSL 2 BASIC17.66■□□□□ 0.42
RXRBP28702 uc_338.24-201ENST00000617802 182 ntBASIC17.66■□□□□ 0.42
RXRBP28702 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC17.66■□□□□ 0.42
RXRBP28702 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RXRBP28702 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RXRBP28702 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.66■□□□□ 0.42
RXRBP28702 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RXRBP28702 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RXRBP28702 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
RXRBP28702 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RXRBP28702 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RXRBP28702 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RXRBP28702 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RXRBP28702 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.65■□□□□ 0.42
RXRBP28702 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC17.65■□□□□ 0.42
RXRBP28702 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RXRBP28702 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RXRBP28702 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RXRBP28702 BX640514.1-201ENST00000583223 1918 ntBASIC17.65■□□□□ 0.42
RXRBP28702 AC024075.2-201ENST00000598112 1473 ntBASIC17.65■□□□□ 0.42
RXRBP28702 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RXRBP28702 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RXRBP28702 RARRES3-202ENST00000354445 696 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RXRBP28702 SNORD23-201ENST00000408876 110 ntBASIC17.65■□□□□ 0.42
RXRBP28702 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RXRBP28702 PIN1P1-202ENST00000439639 301 ntBASIC17.65■□□□□ 0.42
RXRBP28702 LAIR1-217ENST00000474878 814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RXRBP28702 RN7SL756P-201ENST00000488739 268 ntBASIC17.65■□□□□ 0.42
RXRBP28702 AC104117.1-201ENST00000517817 900 ntBASIC17.65■□□□□ 0.42
RXRBP28702 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC17.65■□□□□ 0.42
RXRBP28702 AC018868.2-201ENST00000559655 1259 ntBASIC17.65■□□□□ 0.42
RXRBP28702 snoZ6.3-201ENST00000583496 76 ntBASIC17.65■□□□□ 0.42
RXRBP28702 AC010325.1-203ENST00000636757 380 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
RXRBP28702 TEAD1-207ENST00000638666 1281 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
RXRBP28702 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC17.65■□□□□ 0.42
RXRBP28702 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RXRBP28702 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RXRBP28702 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RXRBP28702 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.65■□□□□ 0.42
RXRBP28702 MEMO1-207ENST00000426310 1336 ntTSL 2 BASIC17.65■□□□□ 0.42
RXRBP28702 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RXRBP28702 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RXRBP28702 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RXRBP28702 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RXRBP28702 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RXRBP28702 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RXRBP28702 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RXRBP28702 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RXRBP28702 CREBRF-203ENST00000520420 1660 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RXRBP28702 AC007622.2-202ENST00000546714 1680 ntTSL 2 BASIC17.64■□□□□ 0.42
RXRBP28702 AC040160.2-201ENST00000623816 1675 ntBASIC17.64■□□□□ 0.42
RXRBP28702 CHIAP2-204ENST00000532686 1449 ntBASIC17.64■□□□□ 0.42
RXRBP28702 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.64■□□□□ 0.42
RXRBP28702 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.64■□□□□ 0.41
RXRBP28702 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RXRBP28702 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RXRBP28702 LIPC-204ENST00000433326 1484 ntTSL 2 BASIC17.64■□□□□ 0.41
RXRBP28702 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RXRBP28702 AP000437.1-201ENST00000624057 2085 ntBASIC17.64■□□□□ 0.41
RXRBP28702 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms