Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PRKCAP17252 AC090643.2-201ENST00000623442 2029 ntBASIC13.06□□□□□ -0.32
PRKCAP17252 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PRKCAP17252 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PRKCAP17252 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.06□□□□□ -0.32
PRKCAP17252 AP002761.4-201ENST00000565433 3361 ntBASIC13.06□□□□□ -0.32
PRKCAP17252 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.06□□□□□ -0.32
PRKCAP17252 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PRKCAP17252 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
PRKCAP17252 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PRKCAP17252 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.06□□□□□ -0.32
PRKCAP17252 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.06□□□□□ -0.32
PRKCAP17252 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PRKCAP17252 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PRKCAP17252 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.06□□□□□ -0.32
PRKCAP17252 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
PRKCAP17252 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
PRKCAP17252 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.06□□□□□ -0.32
PRKCAP17252 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.06□□□□□ -0.32
PRKCAP17252 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC13.06□□□□□ -0.32
PRKCAP17252 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PRKCAP17252 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PRKCAP17252 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
PRKCAP17252 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
PRKCAP17252 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PRKCAP17252 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PRKCAP17252 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PRKCAP17252 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PRKCAP17252 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.06□□□□□ -0.32
PRKCAP17252 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.06□□□□□ -0.32
PRKCAP17252 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.06□□□□□ -0.32
PRKCAP17252 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.06□□□□□ -0.32
PRKCAP17252 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.06□□□□□ -0.32
PRKCAP17252 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.06□□□□□ -0.32
PRKCAP17252 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.06□□□□□ -0.32
PRKCAP17252 AC243960.2-201ENST00000600996 747 ntBASIC13.06□□□□□ -0.32
PRKCAP17252 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
PRKCAP17252 AL451050.2-201ENST00000606967 682 ntBASIC13.06□□□□□ -0.32
PRKCAP17252 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.06□□□□□ -0.32
PRKCAP17252 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PRKCAP17252 MEX3B-202ENST00000558133 4333 ntBASIC13.06□□□□□ -0.32
PRKCAP17252 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.06□□□□□ -0.32
PRKCAP17252 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
PRKCAP17252 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
PRKCAP17252 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
PRKCAP17252 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PRKCAP17252 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PRKCAP17252 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
PRKCAP17252 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
PRKCAP17252 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
PRKCAP17252 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
PRKCAP17252 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PRKCAP17252 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PRKCAP17252 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
PRKCAP17252 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PRKCAP17252 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.05□□□□□ -0.32
PRKCAP17252 CCT8L1P-201ENST00000465400 1674 ntBASIC13.05□□□□□ -0.32
PRKCAP17252 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PRKCAP17252 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC13.05□□□□□ -0.32
PRKCAP17252 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PRKCAP17252 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC13.05□□□□□ -0.32
PRKCAP17252 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PRKCAP17252 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PRKCAP17252 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
PRKCAP17252 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PRKCAP17252 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.05□□□□□ -0.32
PRKCAP17252 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.05□□□□□ -0.32
PRKCAP17252 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PRKCAP17252 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
PRKCAP17252 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PRKCAP17252 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PRKCAP17252 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PRKCAP17252 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PRKCAP17252 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.05□□□□□ -0.32
PRKCAP17252 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PRKCAP17252 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PRKCAP17252 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.05□□□□□ -0.32
PRKCAP17252 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.05□□□□□ -0.32
PRKCAP17252 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PRKCAP17252 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.05□□□□□ -0.32
PRKCAP17252 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
PRKCAP17252 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.05□□□□□ -0.32
PRKCAP17252 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PRKCAP17252 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
PRKCAP17252 AC092580.1-201ENST00000433998 658 ntBASIC13.05□□□□□ -0.32
PRKCAP17252 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.05□□□□□ -0.32
PRKCAP17252 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.05□□□□□ -0.32
PRKCAP17252 AC091804.1-201ENST00000486888 567 ntBASIC13.05□□□□□ -0.32
PRKCAP17252 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.05□□□□□ -0.32
PRKCAP17252 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PRKCAP17252 AP001258.2-201ENST00000529891 490 ntBASIC13.05□□□□□ -0.32
PRKCAP17252 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.05□□□□□ -0.32
PRKCAP17252 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.05□□□□□ -0.32
PRKCAP17252 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.05□□□□□ -0.32
PRKCAP17252 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.05□□□□□ -0.32
PRKCAP17252 AP002353.1-201ENST00000528257 1599 ntBASIC13.05□□□□□ -0.32
PRKCAP17252 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
PRKCAP17252 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PRKCAP17252 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PRKCAP17252 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms