Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1DP16402 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1DP16402 AC022364.1-202ENST00000617468 2409 ntBASIC11.9□□□□□ -0.5
HIST1H1DP16402 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1DP16402 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 AC107375.1-201ENST00000564464 2231 ntBASIC11.9□□□□□ -0.5
HIST1H1DP16402 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1DP16402 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1DP16402 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1DP16402 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1DP16402 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1DP16402 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1DP16402 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1DP16402 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1DP16402 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1DP16402 JTB-202ENST00000356648 1040 ntTSL 2 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1DP16402 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1DP16402 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 BCRP1-201ENST00000444246 691 ntBASIC11.9□□□□□ -0.5
HIST1H1DP16402 AC100850.1-201ENST00000506768 649 ntBASIC11.9□□□□□ -0.5
HIST1H1DP16402 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 AP002353.1-201ENST00000528257 1599 ntBASIC11.9□□□□□ -0.5
HIST1H1DP16402 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1DP16402 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 AC100827.2-201ENST00000563214 1194 ntBASIC11.9□□□□□ -0.5
HIST1H1DP16402 AP006547.1-201ENST00000563435 692 ntBASIC11.9□□□□□ -0.5
HIST1H1DP16402 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 MIR4783-201ENST00000580343 82 ntBASIC11.9□□□□□ -0.5
HIST1H1DP16402 AC005962.1-201ENST00000584100 773 ntBASIC11.9□□□□□ -0.5
HIST1H1DP16402 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 AC008735.3-201ENST00000596646 500 ntBASIC11.9□□□□□ -0.5
HIST1H1DP16402 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1DP16402 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1DP16402 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1DP16402 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1DP16402 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1DP16402 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1DP16402 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1DP16402 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1DP16402 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC11.9□□□□□ -0.5
HIST1H1DP16402 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
HIST1H1DP16402 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.51
HIST1H1DP16402 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H1DP16402 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H1DP16402 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
HIST1H1DP16402 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
HIST1H1DP16402 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
HIST1H1DP16402 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
HIST1H1DP16402 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
HIST1H1DP16402 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H1DP16402 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
HIST1H1DP16402 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.51
HIST1H1DP16402 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
HIST1H1DP16402 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC11.89□□□□□ -0.51
HIST1H1DP16402 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1DP16402 POM121L10P-201ENST00000436994 1285 ntBASIC11.89□□□□□ -0.51
HIST1H1DP16402 TTTY23B-201ENST00000442790 549 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms