Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VCANP13611 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.91□□□□□ -0.18
VCANP13611 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VCANP13611 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC13.91□□□□□ -0.18
VCANP13611 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VCANP13611 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.91□□□□□ -0.18
VCANP13611 HPRT1-201ENST00000298556 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VCANP13611 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
VCANP13611 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
VCANP13611 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VCANP13611 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VCANP13611 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VCANP13611 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.91□□□□□ -0.18
VCANP13611 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VCANP13611 GSTA4-201ENST00000370959 793 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
VCANP13611 PDCD4-AS1-201ENST00000420367 778 ntTSL 2 BASIC13.91□□□□□ -0.18
VCANP13611 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC13.91□□□□□ -0.18
VCANP13611 HTATSF1P1-201ENST00000432008 984 ntBASIC13.91□□□□□ -0.18
VCANP13611 RPL29P2-202ENST00000498671 657 ntBASIC13.91□□□□□ -0.18
VCANP13611 MIR4527HG-201ENST00000586905 675 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VCANP13611 AC092471.1-202ENST00000637160 999 ntBASIC13.91□□□□□ -0.18
VCANP13611 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
VCANP13611 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.91□□□□□ -0.18
VCANP13611 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VCANP13611 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
VCANP13611 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VCANP13611 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
VCANP13611 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
VCANP13611 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VCANP13611 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VCANP13611 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
VCANP13611 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
VCANP13611 AC068760.1-201ENST00000493579 1953 ntBASIC13.9□□□□□ -0.18
VCANP13611 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
VCANP13611 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VCANP13611 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VCANP13611 RCBTB2-206ENST00000544904 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VCANP13611 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VCANP13611 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VCANP13611 HNRNPA1P34-201ENST00000391992 950 ntBASIC13.9□□□□□ -0.18
VCANP13611 AP001341.1-201ENST00000409758 763 ntTSL 3 BASIC13.9□□□□□ -0.18
VCANP13611 AKR1B1P4-201ENST00000426552 922 ntBASIC13.9□□□□□ -0.18
VCANP13611 LAIR1-217ENST00000474878 814 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VCANP13611 RN7SL483P-201ENST00000478417 285 ntBASIC13.9□□□□□ -0.18
VCANP13611 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
VCANP13611 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VCANP13611 MIR4326-201ENST00000582203 59 ntBASIC13.9□□□□□ -0.18
VCANP13611 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
VCANP13611 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.9□□□□□ -0.18
VCANP13611 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
VCANP13611 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VCANP13611 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VCANP13611 CACYBPP3-201ENST00000406011 625 ntBASIC13.9□□□□□ -0.18
VCANP13611 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VCANP13611 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC13.9□□□□□ -0.18
VCANP13611 MIR8071-1-201ENST00000616769 65 ntBASIC13.9□□□□□ -0.18
VCANP13611 MIR8071-2-201ENST00000616772 65 ntBASIC13.9□□□□□ -0.18
VCANP13611 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
VCANP13611 AL031587.5-201ENST00000624344 1849 ntBASIC13.9□□□□□ -0.18
VCANP13611 TCAF2P1-201ENST00000291129 2421 ntBASIC13.9□□□□□ -0.18
VCANP13611 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
VCANP13611 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
VCANP13611 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VCANP13611 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
VCANP13611 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
VCANP13611 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VCANP13611 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VCANP13611 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.89□□□□□ -0.19
VCANP13611 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
VCANP13611 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
VCANP13611 YAE1D1-201ENST00000223273 899 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VCANP13611 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VCANP13611 ST3GAL1P1-201ENST00000513810 1014 ntBASIC13.89□□□□□ -0.19
VCANP13611 EGLN3-209ENST00000553215 1004 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VCANP13611 AC137932.2-201ENST00000562995 1205 ntTSL 2 BASIC13.89□□□□□ -0.19
VCANP13611 AC106782.3-201ENST00000563429 258 ntBASIC13.89□□□□□ -0.19
VCANP13611 MPHOSPH6-203ENST00000563504 617 ntTSL 2 BASIC13.89□□□□□ -0.19
VCANP13611 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VCANP13611 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VCANP13611 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC13.89□□□□□ -0.19
VCANP13611 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
VCANP13611 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
VCANP13611 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VCANP13611 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VCANP13611 EXOSC1-210ENST00000485122 564 ntTSL 5 BASIC13.89□□□□□ -0.19
VCANP13611 COQ10BP2-201ENST00000513804 724 ntBASIC13.89□□□□□ -0.19
VCANP13611 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.89□□□□□ -0.19
VCANP13611 RPL37A-212ENST00000600880 425 ntTSL 2 BASIC13.89□□□□□ -0.19
VCANP13611 AC239859.5-201ENST00000614100 1232 ntBASIC13.89□□□□□ -0.19
VCANP13611 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VCANP13611 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.89□□□□□ -0.19
VCANP13611 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VCANP13611 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VCANP13611 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
VCANP13611 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
VCANP13611 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
VCANP13611 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VCANP13611 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.89□□□□□ -0.19
VCANP13611 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VCANP13611 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms