Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.55□□□□□ -0.4
CNOT4O95628 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CNOT4O95628 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CNOT4O95628 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.54□□□□□ -0.4
CNOT4O95628 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CNOT4O95628 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.54□□□□□ -0.4
CNOT4O95628 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CNOT4O95628 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.54□□□□□ -0.4
CNOT4O95628 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.54□□□□□ -0.4
CNOT4O95628 AC010327.5-201ENST00000586923 3061 ntBASIC12.54□□□□□ -0.4
CNOT4O95628 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
CNOT4O95628 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CNOT4O95628 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
CNOT4O95628 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.54□□□□□ -0.4
CNOT4O95628 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.54□□□□□ -0.4
CNOT4O95628 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.54□□□□□ -0.4
CNOT4O95628 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.54□□□□□ -0.4
CNOT4O95628 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC12.54□□□□□ -0.4
CNOT4O95628 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.54□□□□□ -0.4
CNOT4O95628 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC12.54□□□□□ -0.4
CNOT4O95628 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.54□□□□□ -0.4
CNOT4O95628 RN7SL181P-201ENST00000462921 277 ntBASIC12.54□□□□□ -0.4
CNOT4O95628 AC130709.1-201ENST00000484779 1212 ntBASIC12.54□□□□□ -0.4
CNOT4O95628 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.54□□□□□ -0.4
CNOT4O95628 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.54□□□□□ -0.4
CNOT4O95628 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.54□□□□□ -0.4
CNOT4O95628 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.54□□□□□ -0.4
CNOT4O95628 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC12.54□□□□□ -0.4
CNOT4O95628 MIR3677-201ENST00000578964 60 ntBASIC12.54□□□□□ -0.4
CNOT4O95628 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.54□□□□□ -0.4
CNOT4O95628 AC051619.9-201ENST00000623237 597 ntBASIC12.54□□□□□ -0.4
CNOT4O95628 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.54□□□□□ -0.4
CNOT4O95628 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CNOT4O95628 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.54□□□□□ -0.4
CNOT4O95628 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.54□□□□□ -0.4
CNOT4O95628 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CNOT4O95628 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 AL359881.3-201ENST00000602640 1721 ntBASIC12.54□□□□□ -0.4
CNOT4O95628 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CNOT4O95628 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNOT4O95628 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CNOT4O95628 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.53□□□□□ -0.4
CNOT4O95628 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.53□□□□□ -0.4
CNOT4O95628 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CNOT4O95628 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CNOT4O95628 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CNOT4O95628 COL6A4P2-202ENST00000504443 2753 ntBASIC12.53□□□□□ -0.4
CNOT4O95628 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CNOT4O95628 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CNOT4O95628 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CNOT4O95628 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CNOT4O95628 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CNOT4O95628 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
CNOT4O95628 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CNOT4O95628 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
CNOT4O95628 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.53□□□□□ -0.4
CNOT4O95628 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CNOT4O95628 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CNOT4O95628 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CNOT4O95628 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CNOT4O95628 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.53□□□□□ -0.4
CNOT4O95628 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CNOT4O95628 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CNOT4O95628 AL583805.1-201ENST00000391389 531 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms