Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 MIR566-201ENST00000385187 94 ntBASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 CFL1P6-201ENST00000400899 494 ntBASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 MIR1227-201ENST00000408484 88 ntBASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 AL080243.1-201ENST00000423293 1060 ntBASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 MEP1AP1-201ENST00000636082 1097 ntBASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 AC139749.1-202ENST00000617529 3139 ntBASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPO2Q9UMS6 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
SYNPO2Q9UMS6 AC009474.1-201ENST00000455096 1565 ntBASIC15.83■□□□□ 0.13
SYNPO2Q9UMS6 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SYNPO2Q9UMS6 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SYNPO2Q9UMS6 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SYNPO2Q9UMS6 CR383656.2-201ENST00000548656 2254 ntBASIC15.83■□□□□ 0.13
SYNPO2Q9UMS6 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 SDCBP2P1-201ENST00000416115 614 ntBASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 AC244197.1-201ENST00000456494 951 ntBASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 AC010234.1-201ENST00000494599 870 ntBASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 KNOP1P1-201ENST00000542108 989 ntBASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 METTL7AP1-201ENST00000547343 496 ntBASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 AP000553.2-201ENST00000609038 441 ntBASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 HMGB1P24-201ENST00000611897 328 ntBASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 RARS-210ENST00000626454 177 ntTSL 5 BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms