Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 RPS9P1-201ENST00000419943 583 ntBASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 AC026320.2-201ENST00000434379 478 ntBASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 BRD7P5-201ENST00000299197 1822 ntBASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 AL805961.2-201ENST00000642139 4817 ntBASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 FAM90A2P-201ENST00000511144 1395 ntBASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 FAM90A25P-201ENST00000528404 1395 ntBASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 KRT17P5-201ENST00000332088 839 ntBASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 BCYRN1-201ENST00000418539 200 ntBASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 RPSAP15-201ENST00000448168 861 ntBASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 AC114947.1-202ENST00000514136 344 ntBASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 AC245884.6-201ENST00000515672 1067 ntBASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms