Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC253536.4-201ENST00000440539 267 ntBASIC14.85□□□□□ -0.03
CD248Q9HCU0 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 AL035414.1-201ENST00000451327 857 ntBASIC14.85□□□□□ -0.03
CD248Q9HCU0 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 AL353726.2-201ENST00000623259 884 ntBASIC14.85□□□□□ -0.03
CD248Q9HCU0 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD248Q9HCU0 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD248Q9HCU0 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD248Q9HCU0 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD248Q9HCU0 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD248Q9HCU0 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD248Q9HCU0 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD248Q9HCU0 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD248Q9HCU0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD248Q9HCU0 TMBIM7P-202ENST00000641474 1516 ntBASIC14.84□□□□□ -0.03
CD248Q9HCU0 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD248Q9HCU0 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 IGF1-203ENST00000392904 761 ntTSL 5 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 AC026803.1-201ENST00000569130 274 ntBASIC14.84□□□□□ -0.03
CD248Q9HCU0 MIR3147-201ENST00000577811 66 ntBASIC14.84□□□□□ -0.03
CD248Q9HCU0 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 AC073352.2-201ENST00000609385 439 ntBASIC14.84□□□□□ -0.03
CD248Q9HCU0 AC103691.2-201ENST00000618824 433 ntBASIC14.84□□□□□ -0.03
CD248Q9HCU0 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 GOLGA2P5-201ENST00000266746 2395 ntBASIC14.84□□□□□ -0.03
CD248Q9HCU0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD248Q9HCU0 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD248Q9HCU0 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD248Q9HCU0 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD248Q9HCU0 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD248Q9HCU0 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD248Q9HCU0 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD248Q9HCU0 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD248Q9HCU0 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CD248Q9HCU0 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD248Q9HCU0 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD248Q9HCU0 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.83□□□□□ -0.03
CD248Q9HCU0 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.83□□□□□ -0.03
CD248Q9HCU0 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.83□□□□□ -0.03
CD248Q9HCU0 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC14.83□□□□□ -0.03
CD248Q9HCU0 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CD248Q9HCU0 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CD248Q9HCU0 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC14.83□□□□□ -0.04
CD248Q9HCU0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.83□□□□□ -0.04
CD248Q9HCU0 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD248Q9HCU0 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD248Q9HCU0 AL590440.2-201ENST00000641973 1595 ntBASIC14.83□□□□□ -0.04
CD248Q9HCU0 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD248Q9HCU0 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD248Q9HCU0 AL445209.1-201ENST00000607269 3491 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms