Protein–RNA interactions for Protein: Q9HCJ0

TNRC6C, Trinucleotide repeat-containing gene 6C protein, humanhuman

Known RBP Predictions only

Length 1,690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6CQ9HCJ0 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 AC073869.1-201ENST00000415574 2762 ntBASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 SNORA30.1-201ENST00000363193 129 ntBASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 RN7SL33P-201ENST00000462543 342 ntBASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 AC104115.1-201ENST00000484005 623 ntBASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 AF186996.6-201ENST00000485294 149 ntBASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 ABCC6P2-201ENST00000526069 590 ntBASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 ALG10-202ENST00000538927 571 ntTSL 5 BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC16.65■□□□□ 0.26
TNRC6CQ9HCJ0 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.26
TNRC6CQ9HCJ0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TNRC6CQ9HCJ0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
TNRC6CQ9HCJ0 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TNRC6CQ9HCJ0 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 AC011239.2-201ENST00000624820 1489 ntBASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 RN7SKP255-201ENST00000363442 313 ntBASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 RN7SKP203-201ENST00000363618 332 ntBASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 RN7SKP71-201ENST00000364558 318 ntBASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 7SK.1-201ENST00000365328 331 ntBASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 AC009517.1-201ENST00000454750 570 ntBASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 GYG1-209ENST00000483267 801 ntTSL 2 BASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 AC091691.1-201ENST00000583587 1018 ntBASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 AC063977.2-201ENST00000601996 421 ntBASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 AL078624.1-201ENST00000604004 547 ntBASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 AC091807.1-201ENST00000418838 1544 ntBASIC16.64■□□□□ 0.25
TNRC6CQ9HCJ0 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 AC074019.1-201ENST00000428788 1096 ntBASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 AC139143.1-201ENST00000441772 1207 ntBASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 AC067942.1-202ENST00000471756 1057 ntBASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 RN7SL646P-201ENST00000492969 297 ntBASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 MIR6165-201ENST00000614803 84 ntBASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 CA6-205ENST00000480186 1493 ntTSL 2 BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6CQ9HCJ0 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNRC6CQ9HCJ0 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNRC6CQ9HCJ0 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNRC6CQ9HCJ0 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms