Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.85□□□□□ -0.03
ATP2A3Q93084 MIR6842-201ENST00000612539 65 ntBASIC14.85□□□□□ -0.03
ATP2A3Q93084 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.85□□□□□ -0.03
ATP2A3Q93084 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
ATP2A3Q93084 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.85□□□□□ -0.03
ATP2A3Q93084 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
ATP2A3Q93084 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.85□□□□□ -0.03
ATP2A3Q93084 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
ATP2A3Q93084 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
ATP2A3Q93084 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.85□□□□□ -0.03
ATP2A3Q93084 RN7SL832P-201ENST00000607781 1756 ntBASIC14.85□□□□□ -0.03
ATP2A3Q93084 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
ATP2A3Q93084 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.85□□□□□ -0.03
ATP2A3Q93084 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.85□□□□□ -0.03
ATP2A3Q93084 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.85□□□□□ -0.03
ATP2A3Q93084 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP2A3Q93084 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP2A3Q93084 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATP2A3Q93084 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATP2A3Q93084 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATP2A3Q93084 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATP2A3Q93084 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP2A3Q93084 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP2A3Q93084 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP2A3Q93084 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATP2A3Q93084 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP2A3Q93084 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATP2A3Q93084 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 AC005586.2-201ENST00000563946 837 ntBASIC14.84□□□□□ -0.03
ATP2A3Q93084 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP2A3Q93084 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 WT1-AS_6.1-201ENST00000614919 121 ntBASIC14.84□□□□□ -0.03
ATP2A3Q93084 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP2A3Q93084 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP2A3Q93084 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP2A3Q93084 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATP2A3Q93084 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP2A3Q93084 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP2A3Q93084 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATP2A3Q93084 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.84□□□□□ -0.03
ATP2A3Q93084 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP2A3Q93084 AC089987.1-201ENST00000551654 2209 ntBASIC14.84□□□□□ -0.03
ATP2A3Q93084 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP2A3Q93084 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP2A3Q93084 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP2A3Q93084 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
ATP2A3Q93084 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ATP2A3Q93084 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ATP2A3Q93084 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ATP2A3Q93084 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ATP2A3Q93084 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
ATP2A3Q93084 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
ATP2A3Q93084 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ATP2A3Q93084 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ATP2A3Q93084 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ATP2A3Q93084 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ATP2A3Q93084 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ATP2A3Q93084 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATP2A3Q93084 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATP2A3Q93084 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATP2A3Q93084 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATP2A3Q93084 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
ATP2A3Q93084 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.83□□□□□ -0.04
ATP2A3Q93084 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ATP2A3Q93084 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms