Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 HNRNPA1P27-201ENST00000412087 955 ntBASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 IGHV3-71-201ENST00000523324 359 ntBASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 DUX4L45-201ENST00000566406 1057 ntBASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 DUX4L46-201ENST00000566845 751 ntBASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 AC132192.2-201ENST00000596206 1147 ntBASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 AC244157.2-201ENST00000616239 1006 ntBASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 AC118758.2-201ENST00000614242 2813 ntBASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 AC010970.1-201ENST00000445125 1848 ntBASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 AL031719.1-201ENST00000623365 2587 ntBASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 MIR658-201ENST00000385210 100 ntBASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 FAM21FP-201ENST00000426241 1131 ntBASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 AC119751.2-201ENST00000504529 210 ntBASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 AC100850.1-201ENST00000506768 649 ntBASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 JPT2-214ENST00000569765 782 ntTSL 2 BASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 MIR4741-201ENST00000579822 90 ntBASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 EEF1DP1-201ENST00000585891 896 ntBASIC11.86□□□□□ -0.51
RTN4IP1Q8WWV3 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms