Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RNF217Q8TC41 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF217Q8TC41 AC236430.1-201ENST00000402231 743 ntBASIC13.7□□□□□ -0.22
RNF217Q8TC41 AL035633.1-201ENST00000406139 838 ntBASIC13.7□□□□□ -0.22
RNF217Q8TC41 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF217Q8TC41 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF217Q8TC41 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.7□□□□□ -0.22
RNF217Q8TC41 TMEM198B-204ENST00000484016 896 ntBASIC13.7□□□□□ -0.22
RNF217Q8TC41 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF217Q8TC41 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF217Q8TC41 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF217Q8TC41 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.7□□□□□ -0.22
RNF217Q8TC41 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF217Q8TC41 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF217Q8TC41 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF217Q8TC41 TMEM261P1-201ENST00000604899 340 ntBASIC13.7□□□□□ -0.22
RNF217Q8TC41 AP005019.2-201ENST00000615104 511 ntBASIC13.7□□□□□ -0.22
RNF217Q8TC41 PRSS30P-206ENST00000641773 873 ntBASIC13.7□□□□□ -0.22
RNF217Q8TC41 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF217Q8TC41 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF217Q8TC41 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF217Q8TC41 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RNF217Q8TC41 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF217Q8TC41 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RNF217Q8TC41 RPS24-204ENST00000440692 2814 ntTSL 3 BASIC13.7□□□□□ -0.22
RNF217Q8TC41 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF217Q8TC41 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF217Q8TC41 ITGB6-204ENST00000409967 2292 ntTSL 3 BASIC13.7□□□□□ -0.22
RNF217Q8TC41 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF217Q8TC41 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RNF217Q8TC41 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF217Q8TC41 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF217Q8TC41 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RNF217Q8TC41 PAX9-202ENST00000402703 3104 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RNF217Q8TC41 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
RNF217Q8TC41 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF217Q8TC41 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF217Q8TC41 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF217Q8TC41 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF217Q8TC41 LBHD1-204ENST00000431002 2915 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RNF217Q8TC41 CYTH1-210ENST00000589297 3756 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF217Q8TC41 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF217Q8TC41 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF217Q8TC41 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF217Q8TC41 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RNF217Q8TC41 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF217Q8TC41 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF217Q8TC41 PKP4P1-201ENST00000426801 2158 ntBASIC13.69□□□□□ -0.22
RNF217Q8TC41 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF217Q8TC41 KRT8P35-201ENST00000483942 1338 ntBASIC13.69□□□□□ -0.22
RNF217Q8TC41 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF217Q8TC41 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF217Q8TC41 IFFO1-205ENST00000436152 3101 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF217Q8TC41 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF217Q8TC41 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RNF217Q8TC41 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.69□□□□□ -0.22
RNF217Q8TC41 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF217Q8TC41 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF217Q8TC41 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF217Q8TC41 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.69□□□□□ -0.22
RNF217Q8TC41 AL162726.2-201ENST00000438986 1017 ntBASIC13.69□□□□□ -0.22
RNF217Q8TC41 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF217Q8TC41 TPT1P11-201ENST00000458482 498 ntBASIC13.69□□□□□ -0.22
RNF217Q8TC41 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
RNF217Q8TC41 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.69□□□□□ -0.22
RNF217Q8TC41 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.69□□□□□ -0.22
RNF217Q8TC41 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC13.69□□□□□ -0.22
RNF217Q8TC41 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.69□□□□□ -0.22
RNF217Q8TC41 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF217Q8TC41 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
RNF217Q8TC41 AC005252.2-201ENST00000624630 1141 ntBASIC13.69□□□□□ -0.22
RNF217Q8TC41 AC015802.1-201ENST00000588104 1449 ntBASIC13.69□□□□□ -0.22
RNF217Q8TC41 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF217Q8TC41 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF217Q8TC41 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF217Q8TC41 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF217Q8TC41 PDK2-216ENST00000614357 2493 ntTSL 5 BASIC13.69□□□□□ -0.22
RNF217Q8TC41 CDRT4-204ENST00000619038 2498 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF217Q8TC41 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF217Q8TC41 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC13.69□□□□□ -0.22
RNF217Q8TC41 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF217Q8TC41 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF217Q8TC41 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF217Q8TC41 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.69□□□□□ -0.22
RNF217Q8TC41 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF217Q8TC41 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF217Q8TC41 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF217Q8TC41 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF217Q8TC41 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RNF217Q8TC41 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF217Q8TC41 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF217Q8TC41 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF217Q8TC41 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF217Q8TC41 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF217Q8TC41 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF217Q8TC41 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF217Q8TC41 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.68□□□□□ -0.22
RNF217Q8TC41 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF217Q8TC41 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.68□□□□□ -0.22
RNF217Q8TC41 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms