Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 AC116359.1-201ENST00000510731 1099 ntBASIC8.26□□□□□ -1.09
SVIPQ8NHG7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 AC084033.1-201ENST00000550830 633 ntBASIC8.26□□□□□ -1.09
SVIPQ8NHG7 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 AC010530.1-201ENST00000602844 569 ntTSL 4 BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 ZNF761-205ENST00000613950 646 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 AC004241.4-201ENST00000622792 1120 ntBASIC8.26□□□□□ -1.09
SVIPQ8NHG7 AL109924.4-201ENST00000623089 670 ntBASIC8.26□□□□□ -1.09
SVIPQ8NHG7 AK2-202ENST00000373449 3586 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 GOT1-201ENST00000370508 1947 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 PRKAG1-201ENST00000316299 1683 ntTSL 2 BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 LINC01346-201ENST00000412674 3242 ntTSL 2 BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 WDR82-201ENST00000296490 4293 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 WARS2-IT1-201ENST00000423984 2060 ntTSL 2 BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 C14orf93-201ENST00000299088 3354 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 HAUS6-201ENST00000380496 3756 ntTSL 2 BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 GIMAP5-207ENST00000498181 1835 ntAPPRIS P1 TSL 4 BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 SMAD9-203ENST00000399275 5389 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 ARAP1-205ENST00000426523 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 KIF23-207ENST00000559279 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 FCRL1-201ENST00000358292 2778 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 SMPD4P1-203ENST00000443839 2108 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 RHOXF2-201ENST00000371388 2900 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 RMI2-202ENST00000572173 1865 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 INE2-201ENST00000630399 1874 ntBASIC8.26□□□□□ -1.09
SVIPQ8NHG7 HGSNAT-201ENST00000379644 5236 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SVIPQ8NHG7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 GTF2IP1-202ENST00000614592 2047 ntBASIC8.25□□□□□ -1.09
SVIPQ8NHG7 AOC3-206ENST00000613571 3900 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 SNU13-201ENST00000215956 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 SCN5A-204ENST00000414099 8303 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 LILRA4-201ENST00000291759 1944 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 POM121L1P-201ENST00000402027 1934 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 SEMA3F-AS1-202ENST00000437204 2755 ntTSL 2 BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 STAT6-201ENST00000300134 4034 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 AC011453.1-201ENST00000597619 2239 ntBASIC8.25□□□□□ -1.09
SVIPQ8NHG7 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 POLR3A-205ENST00000616246 1668 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 CCR4-201ENST00000330953 3095 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 CAPS-203ENST00000588776 3750 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 AC126603.1-201ENST00000557586 2512 ntBASIC8.25□□□□□ -1.09
SVIPQ8NHG7 NT5E-201ENST00000257770 3548 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 ERBB3-203ENST00000415288 4353 ntTSL 2 BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 AL358176.4-201ENST00000428891 675 ntTSL 2 BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 AC073046.1-201ENST00000441217 390 ntTSL 3 BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 PSMG3-AS1-203ENST00000457484 3839 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 RASGEF1A-203ENST00000395809 4104 ntAPPRIS P3 TSL 2 BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 ANXA11-205ENST00000438331 6965 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 ANKRD22-201ENST00000371930 1596 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 STPG1-202ENST00000337248 2715 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 PPP4R1-202ENST00000400555 3885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 MS4A6A-203ENST00000426738 1736 ntTSL 5 BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SVIPQ8NHG7 LINC02292-201ENST00000554522 1701 ntTSL 2 BASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms