Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 AC215219.1-201ENST00000400706 1817 ntBASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 HSPB1P2-201ENST00000448722 546 ntBASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 RPSAP36-202ENST00000494591 1261 ntBASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 DUX4L46-201ENST00000566845 751 ntBASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 AL033527.4-201ENST00000641026 673 ntBASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 AC092139.4-201ENST00000624318 2794 ntBASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFPL4BQ6ZWI9 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 AC073335.2-201ENST00000610177 3441 ntBASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 AC008806.1-201ENST00000624962 2443 ntBASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 AL354877.1-201ENST00000424412 413 ntBASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 GOLGA2P4-201ENST00000441462 777 ntBASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 AL035414.1-201ENST00000451327 857 ntBASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 AL096828.3-201ENST00000615354 462 ntBASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 AC009093.10-201ENST00000641956 1442 ntBASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFPL4BQ6ZWI9 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFPL4BQ6ZWI9 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFPL4BQ6ZWI9 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.66□□□□□ -0.38
RFPL4BQ6ZWI9 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.66□□□□□ -0.38
RFPL4BQ6ZWI9 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms