Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 MCU-204ENST00000536019 3224 ntTSL 2 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 AC020910.5-201ENST00000623668 1865 ntBASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 RAB27A-201ENST00000336787 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 AL136309.1-201ENST00000403917 691 ntBASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 MIR1909-201ENST00000411312 80 ntBASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 AL355994.2-201ENST00000447882 704 ntBASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 AC022447.6-201ENST00000515522 438 ntBASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.98□□□□□ -0.33
TMEM53Q6P2H8 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 AC060814.4-201ENST00000594169 2163 ntBASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 HNRNPMP1-201ENST00000560685 1768 ntBASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 OR8S1-201ENST00000310194 1080 ntBASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 YBX1P6-201ENST00000442962 1002 ntBASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 KRT223P-202ENST00000449164 1292 ntBASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 ALG3P1-201ENST00000508806 1114 ntBASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms