Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.78□□□□□ -0.36
CXCR4P61073 AC022400.8-201ENST00000623453 3599 ntBASIC12.78□□□□□ -0.36
CXCR4P61073 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 DGCR5-201ENST00000399539 862 ntBASIC12.78□□□□□ -0.36
CXCR4P61073 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.78□□□□□ -0.36
CXCR4P61073 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.78□□□□□ -0.36
CXCR4P61073 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.78□□□□□ -0.36
CXCR4P61073 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.78□□□□□ -0.36
CXCR4P61073 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CXCR4P61073 AC092183.1-201ENST00000469884 875 ntBASIC12.78□□□□□ -0.36
CXCR4P61073 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.78□□□□□ -0.36
CXCR4P61073 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 RNA5SP486-201ENST00000515961 83 ntBASIC12.78□□□□□ -0.36
CXCR4P61073 AP001889.1-201ENST00000525414 633 ntBASIC12.78□□□□□ -0.36
CXCR4P61073 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.78□□□□□ -0.36
CXCR4P61073 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 AC190387.1-201ENST00000551683 408 ntBASIC12.78□□□□□ -0.36
CXCR4P61073 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.78□□□□□ -0.36
CXCR4P61073 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.78□□□□□ -0.36
CXCR4P61073 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.78□□□□□ -0.36
CXCR4P61073 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.78□□□□□ -0.36
CXCR4P61073 AC090386.2-201ENST00000623010 1039 ntBASIC12.78□□□□□ -0.36
CXCR4P61073 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.78□□□□□ -0.36
CXCR4P61073 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CXCR4P61073 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CXCR4P61073 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 MICA-210ENST00000616296 2260 ntTSL 5 BASIC12.78□□□□□ -0.36
CXCR4P61073 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.78□□□□□ -0.36
CXCR4P61073 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CXCR4P61073 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.78□□□□□ -0.36
CXCR4P61073 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.78□□□□□ -0.36
CXCR4P61073 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CXCR4P61073 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CXCR4P61073 FLJ30679-201ENST00000624773 1980 ntBASIC12.78□□□□□ -0.36
CXCR4P61073 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CXCR4P61073 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.78□□□□□ -0.36
CXCR4P61073 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCR4P61073 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CXCR4P61073 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CXCR4P61073 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CXCR4P61073 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CXCR4P61073 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
CXCR4P61073 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC12.77□□□□□ -0.36
CXCR4P61073 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CXCR4P61073 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC12.77□□□□□ -0.36
CXCR4P61073 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.77□□□□□ -0.36
CXCR4P61073 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CXCR4P61073 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CXCR4P61073 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CXCR4P61073 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CXCR4P61073 STRCP1-201ENST00000509801 5328 ntBASIC12.77□□□□□ -0.36
CXCR4P61073 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CXCR4P61073 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CXCR4P61073 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CXCR4P61073 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CXCR4P61073 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CXCR4P61073 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CXCR4P61073 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CXCR4P61073 AC236430.1-201ENST00000402231 743 ntBASIC12.77□□□□□ -0.37
CXCR4P61073 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.77□□□□□ -0.37
CXCR4P61073 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.77□□□□□ -0.37
CXCR4P61073 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.77□□□□□ -0.37
CXCR4P61073 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.77□□□□□ -0.37
CXCR4P61073 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CXCR4P61073 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CXCR4P61073 TP53TG3HP-202ENST00000569755 579 ntBASIC12.77□□□□□ -0.37
CXCR4P61073 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.77□□□□□ -0.37
CXCR4P61073 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.77□□□□□ -0.37
CXCR4P61073 AC006538.3-201ENST00000612495 578 ntBASIC12.77□□□□□ -0.37
CXCR4P61073 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC12.77□□□□□ -0.37
CXCR4P61073 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CXCR4P61073 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CXCR4P61073 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CXCR4P61073 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC12.77□□□□□ -0.37
CXCR4P61073 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CXCR4P61073 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC12.77□□□□□ -0.37
CXCR4P61073 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CXCR4P61073 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CXCR4P61073 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.77□□□□□ -0.37
CXCR4P61073 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CXCR4P61073 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms