Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC12.06□□□□□ -0.48
AP3S2P59780 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.06□□□□□ -0.48
AP3S2P59780 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC12.06□□□□□ -0.48
AP3S2P59780 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
AP3S2P59780 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.05□□□□□ -0.48
AP3S2P59780 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC12.05□□□□□ -0.48
AP3S2P59780 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
AP3S2P59780 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
AP3S2P59780 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC12.05□□□□□ -0.48
AP3S2P59780 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
AP3S2P59780 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC12.05□□□□□ -0.48
AP3S2P59780 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.05□□□□□ -0.48
AP3S2P59780 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.05□□□□□ -0.48
AP3S2P59780 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.05□□□□□ -0.48
AP3S2P59780 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.05□□□□□ -0.48
AP3S2P59780 AC069120.2-201ENST00000524091 540 ntBASIC12.05□□□□□ -0.48
AP3S2P59780 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
AP3S2P59780 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.05□□□□□ -0.48
AP3S2P59780 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.05□□□□□ -0.48
AP3S2P59780 AP001462.1-201ENST00000594089 452 ntBASIC12.05□□□□□ -0.48
AP3S2P59780 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.05□□□□□ -0.48
AP3S2P59780 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
AP3S2P59780 BX640515.1-201ENST00000617215 977 ntBASIC12.05□□□□□ -0.48
AP3S2P59780 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.05□□□□□ -0.48
AP3S2P59780 AC007952.5-201ENST00000572818 1486 ntBASIC12.05□□□□□ -0.48
AP3S2P59780 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.05□□□□□ -0.48
AP3S2P59780 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
AP3S2P59780 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
AP3S2P59780 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.05□□□□□ -0.48
AP3S2P59780 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 STX16-202ENST00000355957 4897 ntTSL 2 BASIC12.05□□□□□ -0.48
AP3S2P59780 PXMP4-203ENST00000409299 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC12.05□□□□□ -0.48
AP3S2P59780 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
AP3S2P59780 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
AP3S2P59780 AC008040.5-201ENST00000599781 1781 ntBASIC12.05□□□□□ -0.48
AP3S2P59780 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 FN1-206ENST00000359671 8524 ntTSL 5 BASIC12.05□□□□□ -0.48
AP3S2P59780 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S2P59780 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.04□□□□□ -0.48
AP3S2P59780 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S2P59780 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
AP3S2P59780 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC12.04□□□□□ -0.48
AP3S2P59780 RPH3A-202ENST00000415485 4452 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
AP3S2P59780 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S2P59780 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
AP3S2P59780 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 ALK-205ENST00000618119 4646 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S2P59780 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
AP3S2P59780 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
AP3S2P59780 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S2P59780 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S2P59780 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
AP3S2P59780 AC103592.1-201ENST00000394513 664 ntBASIC12.04□□□□□ -0.48
AP3S2P59780 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S2P59780 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms