Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC15.25■□□□□ 0.03
NCKAP1LP55160 AC067750.1-201ENST00000608826 6545 ntBASIC15.25■□□□□ 0.03
NCKAP1LP55160 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.25■□□□□ 0.03
NCKAP1LP55160 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NCKAP1LP55160 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 AC006480.2-201ENST00000609770 1337 ntBASIC15.25■□□□□ 0.03
NCKAP1LP55160 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NCKAP1LP55160 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NCKAP1LP55160 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NCKAP1LP55160 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
NCKAP1LP55160 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC15.25■□□□□ 0.03
NCKAP1LP55160 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 RNVU1-8-201ENST00000364272 125 ntBASIC15.25■□□□□ 0.03
NCKAP1LP55160 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NCKAP1LP55160 OR2W2P-201ENST00000406313 909 ntBASIC15.25■□□□□ 0.03
NCKAP1LP55160 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 HNRNPA1P2-207ENST00000432375 960 ntBASIC15.25■□□□□ 0.03
NCKAP1LP55160 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NCKAP1LP55160 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC15.25■□□□□ 0.03
NCKAP1LP55160 RNA5SP417-201ENST00000516459 108 ntBASIC15.25■□□□□ 0.03
NCKAP1LP55160 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC15.25■□□□□ 0.03
NCKAP1LP55160 AP000911.2-201ENST00000534330 502 ntBASIC15.25■□□□□ 0.03
NCKAP1LP55160 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.25■□□□□ 0.03
NCKAP1LP55160 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.25■□□□□ 0.03
NCKAP1LP55160 AC012073.1-201ENST00000606114 1108 ntBASIC15.25■□□□□ 0.03
NCKAP1LP55160 AL359091.4-201ENST00000610052 409 ntBASIC15.25■□□□□ 0.03
NCKAP1LP55160 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC15.25■□□□□ 0.03
NCKAP1LP55160 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.25■□□□□ 0.03
NCKAP1LP55160 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NCKAP1LP55160 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.25■□□□□ 0.03
NCKAP1LP55160 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
NCKAP1LP55160 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 AGAP12P-201ENST00000585227 2359 ntBASIC15.25■□□□□ 0.03
NCKAP1LP55160 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NCKAP1LP55160 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCKAP1LP55160 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCKAP1LP55160 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCKAP1LP55160 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCKAP1LP55160 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCKAP1LP55160 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NCKAP1LP55160 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NCKAP1LP55160 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCKAP1LP55160 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCKAP1LP55160 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCKAP1LP55160 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCKAP1LP55160 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NCKAP1LP55160 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCKAP1LP55160 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NCKAP1LP55160 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 DKKL1P1-201ENST00000400550 698 ntBASIC15.24■□□□□ 0.03
NCKAP1LP55160 RN7SKP109-201ENST00000410592 316 ntBASIC15.24■□□□□ 0.03
NCKAP1LP55160 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 AC078991.1-201ENST00000437297 610 ntBASIC15.24■□□□□ 0.03
NCKAP1LP55160 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCKAP1LP55160 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 IGHV1-12-201ENST00000518307 205 ntBASIC15.24■□□□□ 0.03
NCKAP1LP55160 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCKAP1LP55160 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 AL132994.1-201ENST00000554098 400 ntBASIC15.24■□□□□ 0.03
NCKAP1LP55160 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 AL009176.1-201ENST00000607876 650 ntBASIC15.24■□□□□ 0.03
NCKAP1LP55160 AC092171.5-201ENST00000608012 942 ntBASIC15.24■□□□□ 0.03
NCKAP1LP55160 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
NCKAP1LP55160 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms