Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
NKX2-1P43699 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC11.53□□□□□ -0.56
NKX2-1P43699 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC11.53□□□□□ -0.56
NKX2-1P43699 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
NKX2-1P43699 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC11.53□□□□□ -0.56
NKX2-1P43699 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC11.53□□□□□ -0.56
NKX2-1P43699 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
NKX2-1P43699 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
NKX2-1P43699 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
NKX2-1P43699 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 AC131902.2-201ENST00000566892 2172 ntBASIC11.53□□□□□ -0.56
NKX2-1P43699 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC11.53□□□□□ -0.56
NKX2-1P43699 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC11.53□□□□□ -0.56
NKX2-1P43699 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC11.53□□□□□ -0.56
NKX2-1P43699 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC11.53□□□□□ -0.56
NKX2-1P43699 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC11.53□□□□□ -0.56
NKX2-1P43699 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC11.53□□□□□ -0.56
NKX2-1P43699 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
NKX2-1P43699 NEU3-203ENST00000529024 581 ntTSL 3 BASIC11.53□□□□□ -0.56
NKX2-1P43699 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC11.53□□□□□ -0.56
NKX2-1P43699 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC11.53□□□□□ -0.56
NKX2-1P43699 AC009486.1-201ENST00000569860 813 ntBASIC11.53□□□□□ -0.56
NKX2-1P43699 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC11.53□□□□□ -0.56
NKX2-1P43699 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 AC008825.2-201ENST00000603374 718 ntBASIC11.53□□□□□ -0.56
NKX2-1P43699 AC009118.2-201ENST00000613275 655 ntBASIC11.53□□□□□ -0.56
NKX2-1P43699 AC145423.3-201ENST00000615987 467 ntBASIC11.53□□□□□ -0.56
NKX2-1P43699 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC11.53□□□□□ -0.56
NKX2-1P43699 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC11.53□□□□□ -0.56
NKX2-1P43699 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC11.53□□□□□ -0.56
NKX2-1P43699 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC11.53□□□□□ -0.56
NKX2-1P43699 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
NKX2-1P43699 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC11.53□□□□□ -0.56
NKX2-1P43699 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC11.53□□□□□ -0.56
NKX2-1P43699 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC11.53□□□□□ -0.56
NKX2-1P43699 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC11.53□□□□□ -0.56
NKX2-1P43699 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC11.53□□□□□ -0.56
NKX2-1P43699 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
NKX2-1P43699 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
NKX2-1P43699 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
NKX2-1P43699 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC11.52□□□□□ -0.56
NKX2-1P43699 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC11.52□□□□□ -0.56
NKX2-1P43699 USP39-220ENST00000613444 2161 ntTSL 2 BASIC11.52□□□□□ -0.56
NKX2-1P43699 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.56
NKX2-1P43699 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NKX2-1P43699 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC11.52□□□□□ -0.56
NKX2-1P43699 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
NKX2-1P43699 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NKX2-1P43699 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NKX2-1P43699 AC007952.5-201ENST00000572818 1486 ntBASIC11.52□□□□□ -0.56
NKX2-1P43699 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
NKX2-1P43699 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 TPM3P8-201ENST00000330554 643 ntBASIC11.52□□□□□ -0.57
NKX2-1P43699 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
NKX2-1P43699 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC11.52□□□□□ -0.57
NKX2-1P43699 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 MRPS18AP1-201ENST00000414458 589 ntBASIC11.52□□□□□ -0.57
NKX2-1P43699 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms