Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTGFP29279 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CTGFP29279 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CTGFP29279 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTGFP29279 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC15.31■□□□□ 0.04
CTGFP29279 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTGFP29279 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CTGFP29279 AC104640.1-201ENST00000562617 2109 ntBASIC15.31■□□□□ 0.04
CTGFP29279 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTGFP29279 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTGFP29279 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTGFP29279 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTGFP29279 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTGFP29279 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTGFP29279 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CTGFP29279 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTGFP29279 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC15.31■□□□□ 0.04
CTGFP29279 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC15.31■□□□□ 0.04
CTGFP29279 RPL3P9-201ENST00000463217 1183 ntBASIC15.31■□□□□ 0.04
CTGFP29279 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTGFP29279 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC15.31■□□□□ 0.04
CTGFP29279 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC15.31■□□□□ 0.04
CTGFP29279 BX510359.7-201ENST00000619819 630 ntBASIC15.31■□□□□ 0.04
CTGFP29279 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC15.31■□□□□ 0.04
CTGFP29279 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC15.31■□□□□ 0.04
CTGFP29279 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC15.31■□□□□ 0.04
CTGFP29279 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTGFP29279 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTGFP29279 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTGFP29279 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.31■□□□□ 0.04
CTGFP29279 IMPDH1P5-201ENST00000439688 1540 ntBASIC15.31■□□□□ 0.04
CTGFP29279 GBAP1-208ENST00000566701 1546 ntBASIC15.31■□□□□ 0.04
CTGFP29279 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTGFP29279 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTGFP29279 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTGFP29279 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTGFP29279 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.31■□□□□ 0.04
CTGFP29279 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CTGFP29279 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.3■□□□□ 0.04
CTGFP29279 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTGFP29279 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTGFP29279 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTGFP29279 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTGFP29279 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CTGFP29279 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTGFP29279 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTGFP29279 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTGFP29279 RN7SKP255-201ENST00000363442 313 ntBASIC15.3■□□□□ 0.04
CTGFP29279 RN7SKP203-201ENST00000363618 332 ntBASIC15.3■□□□□ 0.04
CTGFP29279 RN7SKP71-201ENST00000364558 318 ntBASIC15.3■□□□□ 0.04
CTGFP29279 7SK.1-201ENST00000365328 331 ntBASIC15.3■□□□□ 0.04
CTGFP29279 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
CTGFP29279 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTGFP29279 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CTGFP29279 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTGFP29279 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTGFP29279 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CTGFP29279 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTGFP29279 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC15.3■□□□□ 0.04
CTGFP29279 TMEM256P1-201ENST00000430550 340 ntBASIC15.3■□□□□ 0.04
CTGFP29279 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC15.3■□□□□ 0.04
CTGFP29279 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC15.3■□□□□ 0.04
CTGFP29279 AC067942.1-202ENST00000471756 1057 ntBASIC15.3■□□□□ 0.04
CTGFP29279 HNRNPA1P4-201ENST00000509706 756 ntBASIC15.3■□□□□ 0.04
CTGFP29279 AACSP1-202ENST00000521412 1095 ntBASIC15.3■□□□□ 0.04
CTGFP29279 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC15.3■□□□□ 0.04
CTGFP29279 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC15.3■□□□□ 0.04
CTGFP29279 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTGFP29279 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTGFP29279 NEMF-210ENST00000556672 590 ntTSL 2 BASIC15.3■□□□□ 0.04
CTGFP29279 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC15.3■□□□□ 0.04
CTGFP29279 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC15.3■□□□□ 0.04
CTGFP29279 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTGFP29279 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTGFP29279 AC010601.2-201ENST00000623060 774 ntBASIC15.3■□□□□ 0.04
CTGFP29279 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTGFP29279 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTGFP29279 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTGFP29279 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTGFP29279 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTGFP29279 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTGFP29279 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.3■□□□□ 0.04
CTGFP29279 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.3■□□□□ 0.04
CTGFP29279 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.29■□□□□ 0.04
CTGFP29279 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTGFP29279 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTGFP29279 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC15.29■□□□□ 0.04
CTGFP29279 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTGFP29279 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC15.29■□□□□ 0.04
CTGFP29279 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CTGFP29279 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTGFP29279 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTGFP29279 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.29■□□□□ 0.04
CTGFP29279 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC15.29■□□□□ 0.04
CTGFP29279 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTGFP29279 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTGFP29279 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CTGFP29279 LINC00552-201ENST00000625151 2579 ntBASIC15.29■□□□□ 0.04
CTGFP29279 MARCKSL1P2-201ENST00000401037 976 ntBASIC15.29■□□□□ 0.04
CTGFP29279 AC074019.1-201ENST00000428788 1096 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms