Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.49□□□□□ -0.25
HTR1EP28566 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.49□□□□□ -0.25
HTR1EP28566 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1EP28566 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1EP28566 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
HTR1EP28566 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1EP28566 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1EP28566 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC13.49□□□□□ -0.25
HTR1EP28566 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
HTR1EP28566 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.49□□□□□ -0.25
HTR1EP28566 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.49□□□□□ -0.25
HTR1EP28566 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1EP28566 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1EP28566 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.49□□□□□ -0.25
HTR1EP28566 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1EP28566 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.49□□□□□ -0.25
HTR1EP28566 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
HTR1EP28566 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.49□□□□□ -0.25
HTR1EP28566 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
HTR1EP28566 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.49□□□□□ -0.25
HTR1EP28566 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.49□□□□□ -0.25
HTR1EP28566 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1EP28566 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC13.49□□□□□ -0.25
HTR1EP28566 RN7SL11P-201ENST00000471305 293 ntBASIC13.49□□□□□ -0.25
HTR1EP28566 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1EP28566 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.49□□□□□ -0.25
HTR1EP28566 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.49□□□□□ -0.25
HTR1EP28566 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1EP28566 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.49□□□□□ -0.25
HTR1EP28566 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.49□□□□□ -0.25
HTR1EP28566 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.49□□□□□ -0.25
HTR1EP28566 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13.49□□□□□ -0.25
HTR1EP28566 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1EP28566 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.49□□□□□ -0.25
HTR1EP28566 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1EP28566 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1EP28566 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
HTR1EP28566 CES1P1-201ENST00000421606 1704 ntBASIC13.49□□□□□ -0.25
HTR1EP28566 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
HTR1EP28566 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1EP28566 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1EP28566 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HTR1EP28566 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HTR1EP28566 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1EP28566 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1EP28566 AC073862.5-201ENST00000624129 2027 ntBASIC13.49□□□□□ -0.25
HTR1EP28566 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
HTR1EP28566 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1EP28566 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.49□□□□□ -0.25
HTR1EP28566 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1EP28566 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1EP28566 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.49□□□□□ -0.25
HTR1EP28566 GHET1-201ENST00000627071 1906 ntBASIC13.49□□□□□ -0.25
HTR1EP28566 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
HTR1EP28566 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1EP28566 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1EP28566 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1EP28566 LAP3P2-201ENST00000454686 1454 ntBASIC13.48□□□□□ -0.25
HTR1EP28566 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1EP28566 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HTR1EP28566 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1EP28566 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1EP28566 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.48□□□□□ -0.25
HTR1EP28566 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC13.48□□□□□ -0.25
HTR1EP28566 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HTR1EP28566 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1EP28566 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1EP28566 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1EP28566 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1EP28566 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
HTR1EP28566 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1EP28566 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.48□□□□□ -0.25
HTR1EP28566 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1EP28566 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC13.48□□□□□ -0.25
HTR1EP28566 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
HTR1EP28566 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
HTR1EP28566 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1EP28566 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1EP28566 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1EP28566 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1EP28566 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1EP28566 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HTR1EP28566 IGF1-203ENST00000392904 761 ntTSL 5 BASIC13.48□□□□□ -0.25
HTR1EP28566 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HTR1EP28566 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1EP28566 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HTR1EP28566 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1EP28566 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
HTR1EP28566 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
HTR1EP28566 AL512310.5-201ENST00000551999 515 ntBASIC13.48□□□□□ -0.25
HTR1EP28566 FGFR3P5-201ENST00000564496 886 ntBASIC13.48□□□□□ -0.25
HTR1EP28566 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1EP28566 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.48□□□□□ -0.25
HTR1EP28566 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1EP28566 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.48□□□□□ -0.25
HTR1EP28566 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1EP28566 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC13.48□□□□□ -0.25
HTR1EP28566 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.48□□□□□ -0.25
HTR1EP28566 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HTR1EP28566 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms