Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOA4P06727 AC092580.1-201ENST00000433998 658 ntBASIC14.1□□□□□ -0.15
APOA4P06727 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.1□□□□□ -0.15
APOA4P06727 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.1□□□□□ -0.15
APOA4P06727 AC007274.1-201ENST00000439805 662 ntBASIC14.1□□□□□ -0.15
APOA4P06727 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOA4P06727 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.1□□□□□ -0.15
APOA4P06727 AC091804.1-201ENST00000486888 567 ntBASIC14.1□□□□□ -0.15
APOA4P06727 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.1□□□□□ -0.15
APOA4P06727 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOA4P06727 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
APOA4P06727 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.1□□□□□ -0.15
APOA4P06727 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.1□□□□□ -0.15
APOA4P06727 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOA4P06727 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.1□□□□□ -0.15
APOA4P06727 MIR4538-201ENST00000581377 78 ntBASIC14.1□□□□□ -0.15
APOA4P06727 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOA4P06727 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
APOA4P06727 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.1□□□□□ -0.15
APOA4P06727 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
APOA4P06727 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.1□□□□□ -0.15
APOA4P06727 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.1□□□□□ -0.15
APOA4P06727 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.1□□□□□ -0.15
APOA4P06727 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOA4P06727 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.1□□□□□ -0.15
APOA4P06727 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOA4P06727 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOA4P06727 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOA4P06727 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
APOA4P06727 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOA4P06727 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.1□□□□□ -0.15
APOA4P06727 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOA4P06727 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOA4P06727 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOA4P06727 AL358781.1-202ENST00000321081 1360 ntBASIC14.09□□□□□ -0.15
APOA4P06727 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOA4P06727 AC005562.1-201ENST00000583030 3219 ntBASIC14.09□□□□□ -0.15
APOA4P06727 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOA4P06727 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOA4P06727 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
APOA4P06727 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC14.09□□□□□ -0.15
APOA4P06727 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.09□□□□□ -0.15
APOA4P06727 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOA4P06727 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
APOA4P06727 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOA4P06727 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOA4P06727 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOA4P06727 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
APOA4P06727 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.09□□□□□ -0.15
APOA4P06727 RN7SKP214-201ENST00000364208 315 ntBASIC14.09□□□□□ -0.15
APOA4P06727 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
APOA4P06727 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOA4P06727 TSPY25P-201ENST00000429463 745 ntBASIC14.09□□□□□ -0.15
APOA4P06727 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.09□□□□□ -0.15
APOA4P06727 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOA4P06727 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.09□□□□□ -0.15
APOA4P06727 AC125604.1-201ENST00000496255 707 ntBASIC14.09□□□□□ -0.15
APOA4P06727 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.09□□□□□ -0.15
APOA4P06727 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.09□□□□□ -0.15
APOA4P06727 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.09□□□□□ -0.15
APOA4P06727 AL157813.1-201ENST00000612996 587 ntBASIC14.09□□□□□ -0.15
APOA4P06727 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.09□□□□□ -0.15
APOA4P06727 AC025183.3-201ENST00000623526 1482 ntBASIC14.09□□□□□ -0.15
APOA4P06727 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.09□□□□□ -0.15
APOA4P06727 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOA4P06727 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
APOA4P06727 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOA4P06727 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.09□□□□□ -0.15
APOA4P06727 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
APOA4P06727 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOA4P06727 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOA4P06727 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
APOA4P06727 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOA4P06727 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14.09□□□□□ -0.15
APOA4P06727 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.09□□□□□ -0.15
APOA4P06727 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOA4P06727 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOA4P06727 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOA4P06727 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.09□□□□□ -0.15
APOA4P06727 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC14.09□□□□□ -0.15
APOA4P06727 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOA4P06727 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
APOA4P06727 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.08□□□□□ -0.15
APOA4P06727 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.08□□□□□ -0.15
APOA4P06727 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.08□□□□□ -0.15
APOA4P06727 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOA4P06727 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOA4P06727 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
APOA4P06727 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOA4P06727 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC14.08□□□□□ -0.16
APOA4P06727 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
APOA4P06727 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.08□□□□□ -0.16
APOA4P06727 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.08□□□□□ -0.16
APOA4P06727 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 MSNP1-201ENST00000511640 1732 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms