Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.5□□□□□ -0.41
APOC1P02654 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC1P02654 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.5□□□□□ -0.41
APOC1P02654 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC1P02654 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOC1P02654 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.5□□□□□ -0.41
APOC1P02654 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
APOC1P02654 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.5□□□□□ -0.41
APOC1P02654 AL391647.1-201ENST00000395664 511 ntBASIC12.5□□□□□ -0.41
APOC1P02654 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOC1P02654 FAM21FP-201ENST00000426241 1131 ntBASIC12.5□□□□□ -0.41
APOC1P02654 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.5□□□□□ -0.41
APOC1P02654 AC006122.1-201ENST00000493323 440 ntBASIC12.5□□□□□ -0.41
APOC1P02654 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.5□□□□□ -0.41
APOC1P02654 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.5□□□□□ -0.41
APOC1P02654 AC003686.1-201ENST00000550956 1034 ntBASIC12.5□□□□□ -0.41
APOC1P02654 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.5□□□□□ -0.41
APOC1P02654 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
APOC1P02654 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.5□□□□□ -0.41
APOC1P02654 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.5□□□□□ -0.41
APOC1P02654 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.5□□□□□ -0.41
APOC1P02654 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.5□□□□□ -0.41
APOC1P02654 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOC1P02654 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
APOC1P02654 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC1P02654 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC1P02654 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
APOC1P02654 AC009474.1-201ENST00000455096 1565 ntBASIC12.5□□□□□ -0.41
APOC1P02654 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
APOC1P02654 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
APOC1P02654 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC1P02654 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
APOC1P02654 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOC1P02654 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC1P02654 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC1P02654 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.5□□□□□ -0.41
APOC1P02654 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.5□□□□□ -0.41
APOC1P02654 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOC1P02654 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.5□□□□□ -0.41
APOC1P02654 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
APOC1P02654 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC1P02654 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
APOC1P02654 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC1P02654 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOC1P02654 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOC1P02654 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC1P02654 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
APOC1P02654 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
APOC1P02654 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.49□□□□□ -0.41
APOC1P02654 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
APOC1P02654 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
APOC1P02654 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 AC007614.4-201ENST00000564048 1827 ntBASIC12.49□□□□□ -0.41
APOC1P02654 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.49□□□□□ -0.41
APOC1P02654 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
APOC1P02654 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
APOC1P02654 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
APOC1P02654 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
APOC1P02654 SHMT1P1-201ENST00000419974 1312 ntBASIC12.49□□□□□ -0.41
APOC1P02654 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
APOC1P02654 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.49□□□□□ -0.41
APOC1P02654 AL035633.1-201ENST00000406139 838 ntBASIC12.49□□□□□ -0.41
APOC1P02654 HLA-V-201ENST00000429037 534 ntBASIC12.49□□□□□ -0.41
APOC1P02654 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 GPR53P-205ENST00000457298 1084 ntBASIC12.49□□□□□ -0.41
APOC1P02654 ACA64.2-201ENST00000459014 129 ntBASIC12.49□□□□□ -0.41
APOC1P02654 AC021723.1-201ENST00000486306 515 ntBASIC12.49□□□□□ -0.41
APOC1P02654 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.49□□□□□ -0.41
APOC1P02654 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.49□□□□□ -0.41
APOC1P02654 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.49□□□□□ -0.41
APOC1P02654 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.49□□□□□ -0.41
APOC1P02654 AC005962.1-201ENST00000584100 773 ntBASIC12.49□□□□□ -0.41
APOC1P02654 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.49□□□□□ -0.41
APOC1P02654 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.49□□□□□ -0.41
APOC1P02654 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
APOC1P02654 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.49□□□□□ -0.41
APOC1P02654 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.49□□□□□ -0.41
APOC1P02654 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.49□□□□□ -0.41
APOC1P02654 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC1P02654 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms