Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-AP01891 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC11.9□□□□□ -0.5
HLA-AP01891 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC11.9□□□□□ -0.5
HLA-AP01891 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC11.9□□□□□ -0.5
HLA-AP01891 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
HLA-AP01891 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC11.9□□□□□ -0.5
HLA-AP01891 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC11.9□□□□□ -0.5
HLA-AP01891 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
HLA-AP01891 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC11.9□□□□□ -0.5
HLA-AP01891 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-AP01891 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-AP01891 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC11.9□□□□□ -0.5
HLA-AP01891 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-AP01891 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
HLA-AP01891 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-AP01891 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
HLA-AP01891 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-AP01891 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-AP01891 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-AP01891 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-AP01891 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.51
HLA-AP01891 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
HLA-AP01891 AC092028.1-202ENST00000641483 3547 ntBASIC11.9□□□□□ -0.51
HLA-AP01891 AC092028.1-201ENST00000641781 3540 ntBASIC11.9□□□□□ -0.51
HLA-AP01891 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
HLA-AP01891 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
HLA-AP01891 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC11.9□□□□□ -0.51
HLA-AP01891 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC11.9□□□□□ -0.51
HLA-AP01891 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
HLA-AP01891 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
HLA-AP01891 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC11.89□□□□□ -0.51
HLA-AP01891 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC11.89□□□□□ -0.51
HLA-AP01891 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC11.89□□□□□ -0.51
HLA-AP01891 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-AP01891 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
HLA-AP01891 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC11.89□□□□□ -0.51
HLA-AP01891 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-AP01891 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-AP01891 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
HLA-AP01891 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC11.89□□□□□ -0.51
HLA-AP01891 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-AP01891 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-AP01891 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC11.89□□□□□ -0.51
HLA-AP01891 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-AP01891 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC11.89□□□□□ -0.51
HLA-AP01891 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-AP01891 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-AP01891 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-AP01891 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-AP01891 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC11.89□□□□□ -0.51
HLA-AP01891 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-AP01891 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC11.89□□□□□ -0.51
HLA-AP01891 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-AP01891 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-AP01891 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC11.89□□□□□ -0.51
HLA-AP01891 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
HLA-AP01891 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-AP01891 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC11.89□□□□□ -0.51
HLA-AP01891 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
HLA-AP01891 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-AP01891 C1QBPP1-201ENST00000400117 770 ntBASIC11.89□□□□□ -0.51
HLA-AP01891 AC087499.6-201ENST00000411576 835 ntBASIC11.89□□□□□ -0.51
HLA-AP01891 AC134915.1-201ENST00000426461 574 ntBASIC11.89□□□□□ -0.51
HLA-AP01891 GALT-202ENST00000450095 1280 ntTSL 2 BASIC11.89□□□□□ -0.51
HLA-AP01891 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC11.89□□□□□ -0.51
HLA-AP01891 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC11.89□□□□□ -0.51
HLA-AP01891 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC11.89□□□□□ -0.51
HLA-AP01891 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC11.89□□□□□ -0.51
HLA-AP01891 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC11.89□□□□□ -0.51
HLA-AP01891 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC11.89□□□□□ -0.51
HLA-AP01891 WASH4P-201ENST00000564273 1246 ntBASIC11.89□□□□□ -0.51
HLA-AP01891 IFT20-206ENST00000578122 834 ntTSL 2 BASIC11.89□□□□□ -0.51
HLA-AP01891 IFT20-208ENST00000578985 831 ntTSL 3 BASIC11.89□□□□□ -0.51
HLA-AP01891 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC11.89□□□□□ -0.51
HLA-AP01891 AC002472.3-201ENST00000640124 621 ntBASIC11.89□□□□□ -0.51
HLA-AP01891 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC11.89□□□□□ -0.51
HLA-AP01891 AC092117.1-201ENST00000621230 3250 ntBASIC11.89□□□□□ -0.51
HLA-AP01891 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
HLA-AP01891 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-AP01891 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC11.89□□□□□ -0.51
HLA-AP01891 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
HLA-AP01891 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
HLA-AP01891 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC11.89□□□□□ -0.51
HLA-AP01891 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC11.89□□□□□ -0.51
HLA-AP01891 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-AP01891 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-AP01891 AOC4P-203ENST00000566825 2289 ntBASIC11.89□□□□□ -0.51
HLA-AP01891 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-AP01891 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.51
HLA-AP01891 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-AP01891 AC025183.3-201ENST00000623526 1482 ntBASIC11.89□□□□□ -0.51
HLA-AP01891 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-AP01891 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-AP01891 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-AP01891 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
HLA-AP01891 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-AP01891 FAM90A11P-201ENST00000518378 2218 ntBASIC11.88□□□□□ -0.51
HLA-AP01891 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
HLA-AP01891 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-AP01891 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms