Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.89□□□□□ -0.35
NKX2-2O95096 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 PES1P2-201ENST00000449745 1735 ntBASIC12.89□□□□□ -0.35
NKX2-2O95096 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC12.89□□□□□ -0.35
NKX2-2O95096 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC12.89□□□□□ -0.35
NKX2-2O95096 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.89□□□□□ -0.35
NKX2-2O95096 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 AC136604.1-202ENST00000425471 771 ntBASIC12.89□□□□□ -0.35
NKX2-2O95096 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC12.89□□□□□ -0.35
NKX2-2O95096 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.89□□□□□ -0.35
NKX2-2O95096 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.89□□□□□ -0.35
NKX2-2O95096 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.89□□□□□ -0.35
NKX2-2O95096 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.89□□□□□ -0.35
NKX2-2O95096 FTH1P22-201ENST00000456305 520 ntBASIC12.89□□□□□ -0.35
NKX2-2O95096 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC12.89□□□□□ -0.35
NKX2-2O95096 AC095040.1-201ENST00000513286 675 ntBASIC12.89□□□□□ -0.35
NKX2-2O95096 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.89□□□□□ -0.35
NKX2-2O95096 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.89□□□□□ -0.35
NKX2-2O95096 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.89□□□□□ -0.35
NKX2-2O95096 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.89□□□□□ -0.35
NKX2-2O95096 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.89□□□□□ -0.35
NKX2-2O95096 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.89□□□□□ -0.35
NKX2-2O95096 MIR4265-201ENST00000582152 99 ntBASIC12.89□□□□□ -0.35
NKX2-2O95096 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.89□□□□□ -0.35
NKX2-2O95096 AL139099.5-201ENST00000635274 300 ntBASIC12.89□□□□□ -0.35
NKX2-2O95096 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.89□□□□□ -0.35
NKX2-2O95096 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.89□□□□□ -0.35
NKX2-2O95096 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.89□□□□□ -0.35
NKX2-2O95096 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.89□□□□□ -0.35
NKX2-2O95096 AC126335.2-201ENST00000623362 4637 ntBASIC12.89□□□□□ -0.35
NKX2-2O95096 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
NKX2-2O95096 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
NKX2-2O95096 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.89□□□□□ -0.35
NKX2-2O95096 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.89□□□□□ -0.35
NKX2-2O95096 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
NKX2-2O95096 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX2-2O95096 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
NKX2-2O95096 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
NKX2-2O95096 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.88□□□□□ -0.35
NKX2-2O95096 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX2-2O95096 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX2-2O95096 TBC1D3J-201ENST00000620719 1426 ntBASIC12.88□□□□□ -0.35
NKX2-2O95096 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
NKX2-2O95096 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.88□□□□□ -0.35
NKX2-2O95096 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX2-2O95096 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX2-2O95096 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.88□□□□□ -0.35
NKX2-2O95096 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NKX2-2O95096 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
NKX2-2O95096 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
NKX2-2O95096 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX2-2O95096 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX2-2O95096 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NKX2-2O95096 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
NKX2-2O95096 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX2-2O95096 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NKX2-2O95096 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NKX2-2O95096 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.88□□□□□ -0.35
NKX2-2O95096 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
NKX2-2O95096 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.88□□□□□ -0.35
NKX2-2O95096 AL133466.1-201ENST00000447582 150 ntBASIC12.88□□□□□ -0.35
NKX2-2O95096 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.88□□□□□ -0.35
NKX2-2O95096 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.88□□□□□ -0.35
NKX2-2O95096 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.88□□□□□ -0.35
NKX2-2O95096 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.88□□□□□ -0.35
NKX2-2O95096 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.88□□□□□ -0.35
NKX2-2O95096 MIR4326-201ENST00000582203 59 ntBASIC12.88□□□□□ -0.35
NKX2-2O95096 SIGLEC22P-201ENST00000599104 714 ntBASIC12.88□□□□□ -0.35
NKX2-2O95096 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.88□□□□□ -0.35
NKX2-2O95096 HPX-213ENST00000615166 826 ntTSL 5 BASIC12.88□□□□□ -0.35
NKX2-2O95096 CU633904.3-201ENST00000624042 1029 ntBASIC12.88□□□□□ -0.35
NKX2-2O95096 AC009145.4-201ENST00000625119 1294 ntBASIC12.88□□□□□ -0.35
NKX2-2O95096 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
NKX2-2O95096 CAP2P1-201ENST00000557743 1390 ntBASIC12.88□□□□□ -0.35
NKX2-2O95096 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.88□□□□□ -0.35
NKX2-2O95096 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX2-2O95096 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.88□□□□□ -0.35
NKX2-2O95096 AC040160.2-201ENST00000623816 1675 ntBASIC12.88□□□□□ -0.35
NKX2-2O95096 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX2-2O95096 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.88□□□□□ -0.35
NKX2-2O95096 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.88□□□□□ -0.35
NKX2-2O95096 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms