Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
EXTL3O43909 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
EXTL3O43909 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EXTL3O43909 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
EXTL3O43909 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EXTL3O43909 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
EXTL3O43909 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EXTL3O43909 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EXTL3O43909 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
EXTL3O43909 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EXTL3O43909 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.15■□□□□ 0.02
EXTL3O43909 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
EXTL3O43909 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EXTL3O43909 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EXTL3O43909 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC15.15■□□□□ 0.02
EXTL3O43909 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC15.15■□□□□ 0.02
EXTL3O43909 ODCP-201ENST00000459650 1639 ntBASIC15.15■□□□□ 0.02
EXTL3O43909 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EXTL3O43909 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EXTL3O43909 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EXTL3O43909 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.15■□□□□ 0.02
EXTL3O43909 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.15■□□□□ 0.02
EXTL3O43909 AP000356.3-201ENST00000382243 753 ntBASIC15.15■□□□□ 0.02
EXTL3O43909 HLA-DMA-203ENST00000395305 777 ntBASIC15.15■□□□□ 0.02
EXTL3O43909 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.15■□□□□ 0.02
EXTL3O43909 EEF1DP2-201ENST00000433698 843 ntBASIC15.15■□□□□ 0.02
EXTL3O43909 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC15.15■□□□□ 0.02
EXTL3O43909 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.15■□□□□ 0.02
EXTL3O43909 FGFR3P1-201ENST00000449999 601 ntBASIC15.15■□□□□ 0.02
EXTL3O43909 AC130709.1-201ENST00000484779 1212 ntBASIC15.15■□□□□ 0.02
EXTL3O43909 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.15■□□□□ 0.02
EXTL3O43909 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.15■□□□□ 0.02
EXTL3O43909 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
EXTL3O43909 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.15■□□□□ 0.02
EXTL3O43909 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
EXTL3O43909 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
EXTL3O43909 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
EXTL3O43909 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EXTL3O43909 AC092053.3-201ENST00000641308 4975 ntBASIC15.15■□□□□ 0.02
EXTL3O43909 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
EXTL3O43909 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
EXTL3O43909 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EXTL3O43909 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC15.15■□□□□ 0.02
EXTL3O43909 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.15■□□□□ 0.02
EXTL3O43909 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC15.15■□□□□ 0.02
EXTL3O43909 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
EXTL3O43909 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EXTL3O43909 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EXTL3O43909 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
EXTL3O43909 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EXTL3O43909 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.14■□□□□ 0.01
EXTL3O43909 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EXTL3O43909 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EXTL3O43909 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EXTL3O43909 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
EXTL3O43909 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EXTL3O43909 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.14■□□□□ 0.01
EXTL3O43909 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EXTL3O43909 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
EXTL3O43909 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
EXTL3O43909 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
EXTL3O43909 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
EXTL3O43909 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
EXTL3O43909 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.14■□□□□ 0.01
EXTL3O43909 RPL3P2-204ENST00000413027 1203 ntBASIC15.14■□□□□ 0.01
EXTL3O43909 GUSBP10-201ENST00000417412 665 ntBASIC15.14■□□□□ 0.01
EXTL3O43909 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EXTL3O43909 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15.14■□□□□ 0.01
EXTL3O43909 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EXTL3O43909 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EXTL3O43909 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.14■□□□□ 0.01
EXTL3O43909 AC104784.1-201ENST00000473096 294 ntBASIC15.14■□□□□ 0.01
EXTL3O43909 RN7SL767P-201ENST00000493013 295 ntBASIC15.14■□□□□ 0.01
EXTL3O43909 MIR3940-201ENST00000579148 102 ntBASIC15.14■□□□□ 0.01
EXTL3O43909 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC15.14■□□□□ 0.01
EXTL3O43909 MIR4326-201ENST00000582203 59 ntBASIC15.14■□□□□ 0.01
EXTL3O43909 AC073352.2-201ENST00000609385 439 ntBASIC15.14■□□□□ 0.01
EXTL3O43909 AC084781.1-201ENST00000613737 656 ntBASIC15.14■□□□□ 0.01
EXTL3O43909 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.14■□□□□ 0.01
EXTL3O43909 AC091769.1-201ENST00000619576 568 ntBASIC15.14■□□□□ 0.01
EXTL3O43909 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.14■□□□□ 0.01
EXTL3O43909 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EXTL3O43909 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EXTL3O43909 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
EXTL3O43909 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EXTL3O43909 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
EXTL3O43909 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EXTL3O43909 CR383656.2-201ENST00000548656 2254 ntBASIC15.14■□□□□ 0.01
EXTL3O43909 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EXTL3O43909 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.14■□□□□ 0.01
EXTL3O43909 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EXTL3O43909 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15.14■□□□□ 0.01
EXTL3O43909 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EXTL3O43909 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EXTL3O43909 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
EXTL3O43909 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms