Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.02■□□□□ -0
CTAGE9A4FU28 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.02■□□□□ -0
CTAGE9A4FU28 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.02■□□□□ -0
CTAGE9A4FU28 AOC4P-203ENST00000566825 2289 ntBASIC15.02□□□□□ -0.01
CTAGE9A4FU28 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CTAGE9A4FU28 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CTAGE9A4FU28 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CTAGE9A4FU28 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CTAGE9A4FU28 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CTAGE9A4FU28 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CTAGE9A4FU28 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CTAGE9A4FU28 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CTAGE9A4FU28 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CTAGE9A4FU28 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CTAGE9A4FU28 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CTAGE9A4FU28 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 AC134312.5-201ENST00000568031 1313 ntBASIC15.01□□□□□ -0.01
CTAGE9A4FU28 AL008718.2-201ENST00000609206 1313 ntBASIC15.01□□□□□ -0.01
CTAGE9A4FU28 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 MIR661-201ENST00000384842 89 ntBASIC15.01□□□□□ -0.01
CTAGE9A4FU28 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 PIN1P1-201ENST00000412108 996 ntBASIC15.01□□□□□ -0.01
CTAGE9A4FU28 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.01□□□□□ -0.01
CTAGE9A4FU28 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 AC012441.1-201ENST00000446669 685 ntBASIC15.01□□□□□ -0.01
CTAGE9A4FU28 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 CTBP2P3-201ENST00000585629 1255 ntBASIC15.01□□□□□ -0.01
CTAGE9A4FU28 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 AL358472.3-201ENST00000608147 415 ntBASIC15.01□□□□□ -0.01
CTAGE9A4FU28 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 AC090386.2-201ENST00000623010 1039 ntBASIC15.01□□□□□ -0.01
CTAGE9A4FU28 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 Z98885.3-201ENST00000624882 1757 ntBASIC15.01□□□□□ -0.01
CTAGE9A4FU28 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTAGE9A4FU28 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC15□□□□□ -0.01
CTAGE9A4FU28 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC15□□□□□ -0.01
CTAGE9A4FU28 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CTAGE9A4FU28 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15□□□□□ -0.01
CTAGE9A4FU28 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC15□□□□□ -0.01
CTAGE9A4FU28 NPTN-IT1-201ENST00000628401 2283 ntBASIC15□□□□□ -0.01
CTAGE9A4FU28 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CTAGE9A4FU28 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CTAGE9A4FU28 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CTAGE9A4FU28 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CTAGE9A4FU28 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CTAGE9A4FU28 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC15□□□□□ -0.01
CTAGE9A4FU28 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CTAGE9A4FU28 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CTAGE9A4FU28 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
CTAGE9A4FU28 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CTAGE9A4FU28 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15□□□□□ -0.01
CTAGE9A4FU28 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15□□□□□ -0.01
CTAGE9A4FU28 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15□□□□□ -0.01
CTAGE9A4FU28 BAATP1-201ENST00000412284 1225 ntBASIC15□□□□□ -0.01
CTAGE9A4FU28 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC15□□□□□ -0.01
CTAGE9A4FU28 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15□□□□□ -0.01
CTAGE9A4FU28 FAM8A4P-201ENST00000435433 1213 ntBASIC15□□□□□ -0.01
CTAGE9A4FU28 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15□□□□□ -0.01
CTAGE9A4FU28 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15□□□□□ -0.01
CTAGE9A4FU28 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15□□□□□ -0.01
CTAGE9A4FU28 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15□□□□□ -0.01
CTAGE9A4FU28 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CTAGE9A4FU28 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CTAGE9A4FU28 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15□□□□□ -0.01
CTAGE9A4FU28 AC140912.1-201ENST00000577171 1054 ntBASIC15□□□□□ -0.01
CTAGE9A4FU28 ECM1P1-201ENST00000604092 1279 ntBASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms