Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 PHBP15-201ENST00000574228 665 ntBASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 LINC01783-202ENST00000614408 828 ntBASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 BX284668.2-205ENST00000619677 828 ntBASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PPARGC1AQ9UBK2 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 AC073548.1-201ENST00000624088 1882 ntBASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 MIR4754-201ENST00000582477 89 ntBASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 AC019294.4-201ENST00000561777 2905 ntBASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 Z82170.1-201ENST00000625081 3192 ntBASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PPARGC1AQ9UBK2 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PPARGC1AQ9UBK2 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PPARGC1AQ9UBK2 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PPARGC1AQ9UBK2 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PPARGC1AQ9UBK2 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PPARGC1AQ9UBK2 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.66□□□□□ -0.06
PPARGC1AQ9UBK2 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PPARGC1AQ9UBK2 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PPARGC1AQ9UBK2 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PPARGC1AQ9UBK2 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PPARGC1AQ9UBK2 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
PPARGC1AQ9UBK2 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
PPARGC1AQ9UBK2 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PPARGC1AQ9UBK2 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.66□□□□□ -0.06
PPARGC1AQ9UBK2 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PPARGC1AQ9UBK2 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.66□□□□□ -0.06
PPARGC1AQ9UBK2 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PPARGC1AQ9UBK2 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PPARGC1AQ9UBK2 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.66□□□□□ -0.06
PPARGC1AQ9UBK2 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PPARGC1AQ9UBK2 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.66□□□□□ -0.06
PPARGC1AQ9UBK2 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.66□□□□□ -0.06
PPARGC1AQ9UBK2 AL662890.1-201ENST00000396818 632 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms